Tools

 TOOLS

• INNUENDO - A novel cross-sectorial platform for the integration of genomics in surveillance of foodborne pathogens. Developed at Mário Ramirez Lab, IMM.

in collaboration with INCD

• chewBBACA - BSR-Based Allele Calling Algorithm. Developed at Mário Ramirez Lab, IMM.

• Tutorial for 16S rRNA gene based microbial diversity analysis using QIIME2, developed by Belén Carbonetto, Bioinformatics Unit, IGC
• Tutorial for the prediction of functional diversity using 16S rRNA gene data with PICRUSt2, developed by Belén Carbonetto, Bioinformatics Unit, IGC
• Document answering FAQs on 16S rRNA gene based microbial diversity analysis, developed by Belén Carbonetto, Bioinformatics Unit, IGC