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ITQB articles published in 2012

Articles indexed in ISI Web of Science

  1. Adamova G., Gardas R. L., Nieuwenhuyzen M., Puga A. V., Rebelo L. P. N., Robertson A. J. and Seddon K. R. (2012) Alkyltributylphosphonium chloride ionic liquids: synthesis, physicochemical properties and crystal structure, Dalton Transactions 41(27): 8316-8332.
  2. de Almeida A. M. and Bendixen E. (2012) Pig proteomics: a review of a species in the crossroad between biomedical and food sciences, Journal of Proteomics 75(14): 4296-4314.
  3. Almeida A. M., Parreira J. R., Santos R., Duque A. S., Francisco R., Tome D. F., Ricardo C. P., Coelho A. V. and Fevereiro P. (2012) A proteomics study of the induction of somatic embryogenesis in Medicago truncatula using 2DE and MALDI-TOF/TOF, Physiologia Plantarum 146(2): 236-249.
  4. Almeida A. S., Queiroga C. S. F., Sousa M. F. Q., Alves P. M. and Vieira H. L. A. (2012) Carbon monoxide modulates apoptosis by reinforcing oxidative metabolism in astrocytes ROLE OF Bcl-2, Journal of Biological Chemistry 287(14): 10761-10770.
  5. Almeida F., Borges V., Ferreira R., Borrego M. J., Gomes J. P. and Mota L. J. (2012) Polymorphisms in inc proteins and differential expression of inc genes among Chlamydia trachomatis strains correlate with invasiveness and tropism of lymphogranuloma venereum isolates, Journal of Bacteriology 194(23): 6574-6585.
  6. Alves E., Henriques B. J., Rodrigues J. V., Prudencio P., Rocha H., Vilarinho L., Martinho R. G. and Gomes C. M. (2012) Mutations at the flavin binding site of ETF:QO yield a MADD-like severe phenotype in Drosophila, Biochimica Et Biophysica Acta-Molecular Basis of Disease 1822(8): 1284-1292.
  7. Andrade J. M., Pobre V., Matos A. M. and Arraiano C. M. (2012) The crucial role of PNPase in the degradation of small RNAs that are not associated with Hfq, Rna-a Publication of the Rna Society 18(4): 844-855.
  8. Arede P., Milheirico C., de Lencastre H. and Oliveira D. C. (2012) The anti-repressor MecR2 promotes the proteolysis of the mecA repressor and enables optimal expression of beta-lactam resistance in MRSA, Plos Pathogens 8(7): e1002816.
  9. Azoia N. G., Fernandes M. M., Micaelo N. M., Soares C. M. and Cavaco-Paulo A. (2012) Molecular modeling of hair keratin/peptide complex: using MM-PBSA calculations to describe experimental binding results, Proteins-Structure Function and Bioinformatics 80(5): 1409-1417.
  10. Baltazar C. S. A., Teixeira V. H. and Soares C. M. (2012) Structural features of NiFeSe and NiFe hydrogenases determining their different properties: a computational approach, Journal of Biological Inorganic Chemistry 17(4): 543-555.
  11. Bandeira V., Peixoto C., Rodrigues A. F., Cruz P. E., Alves P. M., Coroadinha A. S. and Carrondo M. J. T. (2012) Downstream processing of lentiviral vectors: releasing bottlenecks, Human Gene Therapy Methods 23(4): 255-263.
  12. Baptista J. M., Justino M. C., Melo A. M. P., Teixeira M. and Saraiva L. M. (2012) Oxidative stress modulates the nitric oxide defense promoted by Escherichia coli flavorubredoxin, Journal of Bacteriology 194(14): 3611-3617.
  13. Barreto M. C., Houbraken J., Samson R. A., Brito D., Gadanho M. and San Romao M. V. (2012) Unveiling the fungal mycobiota present throughout the cork stopper manufacturing process, FEMS Microbiology Ecology 82(1): 202-214.
  14. Barros M. T., Dey S. S., Maycock C. D. and Rodrigues P. (2012) Metal-free direct amination/aromatization of 2-cyclohexenones to iodo-N-arylanilines and N-arylanilines promoted by iodine, Chemical Communications 48(88): 10901-10903.
  15. Barros M. T., Dey S. S., Maycock C. D. and Rodrigues P. (2012) Preparation of N-arylamines from 2-oxo-7-azobicyclo 4.1.0 heptanes, Tetrahedron 68(31): 6263-6268.
  16. Barros P. M., Goncalves N., Saibo N. J. M. and Oliveira M. M. (2012) Cold acclimation and floral development in almond bud break: insights into the regulatory pathways, Journal of Experimental Botany 63(12): 4585-4596.
  17. Barros P. M., Goncalves N., Saibo N. J. M. and Oliveira M. M. (2012) Functional characterization of two almond C-repeat-binding factors involved in cold response, Tree Physiology 32(9): 1113-1128.
  18. Batista A. P., Marreiros B. C., Louro R. O. and Pereira M. M. (2012) Study of ion translocation by respiratory complex I. A new insight using Na-23 NMR spectroscopy, Biochimica Et Biophysica Acta-Bioenergetics 1817(10): 1810-1816.
  19. Batista A. P., Marreiros B. C. and Pereira M. M. (2012) The role of proton and sodium ions in energy transduction by respiratory complex I, Iubmb Life 64(6): 492-498.
  20. Batista-Nascimento L., Pimentel C., Menezes R. A. and Rodrigues-Pousada C. (2012) Iron and neurodegeneration: from cellular homeostasis to disease, Oxidative Medicine and Cellular Longevity 2012: Article ID 128647.
  21. Bernardes C. E. S., da Piedade M. E. M. and Lopes J. N. C. (2012) Polymorphism in 4 '-Hydroxyacetophenone: a molecular dynamics simulation study, Journal of Physical Chemistry B 116(17): 5179-5184.
  22. Bernier N., Esteves C. V. and Delgado R. (2012) Heteroditopic receptor based on crown ether and cyclen units for the recognition of zwitterionic amino acids, Tetrahedron 68(24): 4860-4868.
  23. Bhattacharjee A., Varanda C., Freire M. G., Matted S., Santos L. M. N. B. F., Marrucho I. M. and Coutinho J. A. P. (2012) Density and viscosity data for binary mixtures of 1-Alkyl-3-methylimidazolium alkylsulfates plus water, Journal of Chemical and Engineering Data 57(12): 3473-3482.
  24. Bonifacio V. D. B., Correia V. G., Pinho M. G., Lima J. C. and Aguiar-Ricardo A. (2012) Blue emission of carbamic acid oligooxazoline biotags, Materials Letters 81: 205-208.
  25. Botelho H. M., Leal S. S., Cardoso I., Yanamandra K., Morozova-Roche L. A., Fritz G. and Gomes C. M. (2012) S100A6 amyloid fibril formation is calcium-modulated and enhances superoxide dismutase-1 (SOD1) aggregation, Journal of Biological Chemistry 287(50): 42233-42242.
  26. Bouchami O., Ben Hassen A., de Lencastre H. and Miragaia M. (2012) High prevalence of mec complex C and ccrC is independent of SCCmec type V in Staphylococcus haemolyticus, European Journal of Clinical Microbiology & Infectious Diseases 31(4): 605-614.
  27. Bradic M., Beerli P., Garcia-de Leon F. J., Esquivel-Bobadilla S. and Borowsky R. L. (2012) Gene flow and population structure in the Mexican blind cavefish complex (Astyanax mexicanus), Bmc Evolutionary Biology 12: ART9.
  28. Brissos V., Chen Z. J. and Martins L. O. (2012) The kinetic role of carboxylate residues in the proximity of the trinuclear centre in the O-2 reactivity of CotA-laccase, Dalton Transactions 41(20): 6247-6255.
  29. Brito C., Simao D., Costa I., Malpique R., Pereira C. I., Fernandes P., Serra M., Schwarz S. C., Schwarz J., Kremer E. J. and Alves P. M. (2012) Generation and genetic modification of 3D cultures of human dopaminergic neurons derived from neural progenitor cells, Methods 56(3): 452-460.
  30. Bruno S. M., Gamelas C. A., Gomes A. C., Valente A. A., Pillinger M., Romao C. C. and Goncalves I. S. (2012) Isomerisation of alpha-pinene oxide in the presence of indenyl allyl dicarbonyl molybdenum(II) and tungsten(II) complexes, Catalysis Communications 23: 58-61.
  31. Cal P. M. S. D., Vicente J. B., Pires E., Coelho A. V., Veiros L. F., Cordeiro C. and Gois P. M. P. (2012) Iminoboronates: a new strategy for reversible protein modification, Journal of the American Chemical Society 134(24): 10299-10305.
  32. Callaghan A. V., Morris B. E. L., Pereira I. A. C., McInerney M. J., Austin R. N., Groves J. T., Kukor J. J., Suflita J. M., Young L. Y., Zylstra G. J. and Wawrik B. (2012) The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation, Environmental Microbiology 14(1): 101-113.
  33. Campos E., Asandei A., McVey C. E., Dias J. C., Oliveira A. S. F., Soares C. M., Luchian T. and Astier Y. (2012) The role of Lys147 in the interaction between MPSA-gold nanoparticles and the alpha-hemolysin nanopore, Langmuir 28(44): 15643-15650.
  34. Cardoso J. M. S. and Royo B. (2012) Unprecedented synthesis of iron-NHC complexes by C-H activation of imidazolium salts. Mild catalysts for reduction of sulfoxides, Chemical Communications 48(41): 4944-4946.
  35. Cardoso S., Lau W., Dias J. E., Fevereiro P. and Maniatis N. (2012) A candidate-gene association study for berry colour and anthocyanin content in Vitis vinifera L, PLoS ONE 7(9): e46021.
  36. Carinhas N., Oliveira R., Alves P. M., Carrondo M. J. T. and Teixeira A. P. (2012) Systems biotechnology of animal cells: the road to prediction, Trends in Biotechnology 30(7): 377-385.
  37. Carrondo M. J. T., Alves P. M., Carinhas N., Glassey J., Hesse F., Merten O. W., Micheletti M., Noll T., Oliveira R., Reichl U., Staby A., Teixeira A. P., Weichert H. and Mandenius C. F. (2012) How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?, Biotechnology Journal 7(12): 1522-1529.
  38. Carvalho S. D., Saraiva R., Maia T. M., Abreu I. A. and Duque P. (2012) XBAT35, a novel arabidopsis RING E3 ligase exhibiting dual targeting of its splice isoforms, is involved in ethyllene-mediated regulation of apical hook curvature, Molecular Plant 5(6): 1295-1309.
  39. Carvalho-Santos Z., Machado P., Alvarez-Martins I., Gouveia S. M., Jana S. C., Duarte P., Amado T., Branco P., Freitas M. C., Silva S. T. N., Antony C., Bandeiras T. M. and Bettencourt-Dias M. (2012) BLD10/CEP135 is a microtubule-associated protein that controls the formation of the flagellum central microtubule pair, Developmental Cell 23(2): 412-424.
  40. Cassan-Wang H., Soler M., Yu H., Camargo E. L. O., Carocha V., Ladouce N., Savelli B., Paiva J. A. P., Leple J. C. and Grima-Pettenati J. (2012) Reference genes for high-throughput quantitative reverse transcription-PCR analysis of gene expression in organs and tissues of Eucalyptus grown in various environmental conditions, Plant and Cell Physiology 53(12): 2101-2116.
  41. Chagas R., Monteiro S. and Ferreira R. B. (2012) Assessment of potential effects of common fining agents used for white wine protein stabilization, American Journal of Enology and Viticulture 63(4): 574-578.
  42. Chahboun G., Brito J. A., Royo B., El Amrani M. A., Gomez-Bengoa E., Mosquera M. E. G., Cuenca T. and Royo E. (2012) Olefin epoxidation catalyzed by cis-Dioxdomolybdenum(VI) complexes containing chiral alkoxo-imino ligands derived from (+)-alpha-pinene, European Journal of Inorganic Chemistry 2012(17): 2940-2949.
  43. Chakraborty S., Iranzo O., Zuiderweg E. R. P. and Pecoraro V. L. (2012) Experimental and theoretical evaluation of multisite Cadmium(II) exchange in designed three-stranded coiled-coil peptides, Journal of the American Chemical Society 134(14): 6191-6203.
  44. Cherian S., Weyens N., Lindberg S. and Vangronsveld J. (2012) Phytoremediation of trace element-contaminated environments and the potential of endophytic bacteria for improving this process, Critical Reviews in Environmental Science and Technology 42(21): 2215-2260.
  45. Conceicao T., de Sousa M. A., Miragaia M., Paulino E., Barroso R., Brito M. J., Sardinha T., Sancho L., Carreiro H., de Sousa G., Machado M. D. and de Lencastre H. (2012) Staphylococcus aureus reservoirs and transmission routes in a Portuguese neonatal intensive care unit: a 30-month surveillance study, Microbial Drug Resistance 18(2): 116-124.
  46. Correia A. C., Minunno F., Caldeira M. C., Banza J., Mateus J., Carneiro M., Wingate L., Shvaleva A., Ramos A., Jongen M., Bugalho M. N., Nogueira C., Lecomte X. and Pereira J. S. (2012) Soil water availability strongly modulates soil CO2 efflux in different Mediterranean ecosystems: Model calibration using the Bayesian approach, Agriculture Ecosystems & Environment 161: 88-100.
  47. Costa A. J. L., Soromenho M. R. C., Shimizu K., Marrucho I. M., Esperanca J. M. S. S., Lopes J. N. C. and Rebelo L. P. N. (2012) Density, thermal expansion and viscosity of cholinium-derived ionic liquids, Chemphyschem 13(7): 1902-1909.
  48. Costa A. J. L., Soromenho M. R. C., Shimizu K., Marrucho I. M., Esperanca J. M. S. S., Lopes J. N. C. and Rebelo L. P. N. (2012) Liquid-liquid equilibrium of cholinium-derived bistriflimide ionic liquids with water and octanol, Journal of Physical Chemistry B 116(30): 9186-9195.
  49. Costa J. M., Ortuno M. F., Lopes C. M. and Chaves M. M. (2012) Grapevine varieties exhibiting differences in stomatal response to water deficit, Functional Plant Biology 39(3): 179-189.
  50. Costa P. M., Milhinhos A., Simoes M., Marum L., Oliveira A. M., Costa M. H. and Miguel C. (2012) Determining DNA strand breakage from embryogenic cell cultures of a conifer species using the single-cell gel electrophoresis assay, Tree Genetics & Genomes 8(2): 425-430.
  51. da Costa S. B., Duarte C., Bourbon A. I., Pinheiro A. C., Serra A. T., Martins M. M., Januario M. I. N., Vicente A. A., Delgadillo I. and da Costa M. L. B. (2012) Effect of the matrix system in the delivery and in vitro bioactivity of microencapsulated Oregano essential oil, Journal of Food Engineering 110(2): 190-199.
  52. Courtois B., Frouin J., Greco R., Bruschi G., Droc G., Hamelin C., Ruiz M., Clement G., Evrard J. C., van Coppenole S., Katsantonis D., Oliveira M., Negrao S., Matos C., Cavigiolo S., Lupotto E., Piffanelli P. and Ahmadi N. (2012) Genetic diversity and population structure in a european collection of rice, Crop Science 52(4): 1663-1675.
  53. Dantas J. M., Morgado L., Londer Y. Y., Fernandes A. P., Louro R. O., Pokkuluri P. R., Schiffer M. and Salgueiro C. A. (2012) Pivotal role of the strictly conserved aromatic residue F15 in the cytochrome c(7) family, Journal of Biological Inorganic Chemistry 17(1): 11-24.
  54. Deive F. J., Rodriguez A., Rebelo L. P. N. and Marrucho I. M. (2012) Extraction of Candida antarctica lipase A from aqueous solutions using imidazolium-based ionic liquids, Separation and Purification Technology 97: 205-210.
  55. Denkmann K., Grein F., Zigann R., Siemen A., Bergmann J., van Helmont S., Nicolai A., Pereira I. A. C. and Dahl C. (2012) Thiosulfate dehydrogenase: a widespread unusual acidophilic c-type cytochrome, Environmental Microbiology 14(10): 2673-2688.
  56. Dias A. M. A., Marceneiro S., Braga M. E. M., Coelho J. F. J., Ferreira A. G. M., Simoes P. N., Veiga H. I. M., Tome L. C., Marrucho I. M., Esperanca J. M. S. S., Matias A. A., Duarte C. M. M., Rebelo L. P. N. and de Sousa H. C. (2012) Phosphonium-based ionic liquids as modifiers for biomedical grade poly(vinyl chloride), Acta Biomaterialia 8(3): 1366-1379.
  57. Fagone P., Mangano K., Coco M., Perciavalle V., Garotta G., Romao C. C. and Nicoletti F. (2012) Therapeutic potential of carbon monoxide in multiple sclerosis, Clinical and Experimental Immunology 167(2): 179-187.
  58. Fernandes A. T., Lopes C., Martins L. O. and Melo E. P. (2012) Unfolding pathway of CotA-laccase and the role of copper on the prevention of refolding through aggregation of the unfolded state, Biochemical and Biophysical Research Communications 422(3): 442-446.
  59. Fernandes F., Vidigal J., Dias M. M., Prather K. L. J., Coroadinha A. S., Teixeira A. P. and Alves P. M. (2012) Flipase-mediated cassette exchange in Sf9 insect cells for stable gene expression, Biotechnology and Bioengineering 109(11): 2836-2844.
  60. Fernandes H. L., Stevenson I. H. and Kording K. P. (2012) Generalization of stochastic visuomotor rotations, PLoS ONE 7(8): e43016.
  61. Fernandes L., Centeno M., Belas A., Nunes T., Alves P. L., Couto N. and Pomba C. (2012) Immediate after birth transmission of epidemic Salmonella enterica Typhimurium monophasic strains in pigs is a likely event, Journal of Antimicrobial Chemotherapy 67(12): 3012-3014.
  62. Fernandes S., Proenca D., Cantante C., Silva F. A., Leandro C., Lourenco S., Milheirico C., de Lencastre H., Cavaco-Silva P., Pimentel M. and Sao-Jose C. (2012) Novel chimerical endolysins with broad antimicrobial activity against methicillin-resistant Staphylococcus aureus, Microbial Drug Resistance 18(3): 333-343.
  63. Ferraz R., Branco L. C., Marrucho I. M., Araujo J. M. M., Rebelo L. P. N., da Ponte M. N., Prudencio C., Noronha J. P. and Petrovski Z. (2012) Development of novel ionic liquids based on ampicillin, Medchemcomm 3(4): 494-497.
  64. Ferreira R., Garcia H., Sousa A. F., Petkovic M., Lamosa P., Freire C. S. R., Silvestre A. J. D., Rebelo L. P. N. and Pereira C. S. (2012) Suberin isolation from cork using ionic liquids: characterisation of ensuing products, New Journal of Chemistry 36(10): 2014-2024.
  65. Ferreira R. B., Freitas R. F. L. and Monteiro S. (2012) Targeting carbohydrates: a novel paradigm for fungal control, European Journal of Plant Pathology 133(1): 117-140.
  66. Ferreira R. T., Silva A. R. C., Pimentel C., Batista-Nascimento L., Rodrigues-Pousada C. and Menezes R. A. (2012) Arsenic stress elicits cytosolic Ca2+ bursts and Crz1 activation in Saccharomyces cerevisiae, Microbiology-Sgm 158: 2293-2302.
  67. Figueiredo D. D., Barros P. M., Cordeiro A. M., Serra T. S., Lourenco T., Chander S., Oliveira M. M. and Saibo N. J. M. (2012) Seven zinc-finger transcription factors are novel regulators of the stress responsive gene OsDREB1B, Journal of Experimental Botany 63(10): 3643-3656.
  68. Figueiredo M. C. O., Lobo S. A. L., Carita J. N., Nobre L. S. and Saraiva L. M. (2012) Bacterioferritin protects the anaerobe Desulfovibrio vulgaris Hildenborough against oxygen, Anaerobe 18(4): 454-458.
  69. Figueiredo T. A., Sobral R. G., Ludovice A. M., de Almeida J. M. F., Bui N. K., Vollmer W., de Lencastre H. and Tomasz A. (2012) Identification of genetic determinants and enzymes involved with the amidation of glutamic acid residues in the Peptidoglycan of Staphylococcus aureus, Plos Pathogens 8(1): e1002508.
  70. Fonseca B. M., Paquete C. M., Salgueiro C. A. and Louro R. O. (2012) The role of intramolecular interactions in the functional control of multiheme cytochromes c, Febs Letters 586(5): 504-509.
  71. Fonseca C., Planchon S., Renaut J., Oliveira M. M. and Batista R. (2012) Characterization of maize allergens-MON810 vs. its non-transgenic counterpart, Journal of Proteomics 75(7): 2027-2037.
  72. de Francesco M., Jacobs J. Z., Nunes F., Serrano M., McKenney P. T., Chua M. H., Henriques A. O. and Eichenberger P. (2012) Physical interaction between coat morphogenetic proteins SpoVID and CotE is necessary for spore encasement in Bacillus subtilis, Journal of Bacteriology 194(18): 4941-4950.
  73. Franco C. F., Soares R., Pires E., Santos R. and Coelho A. V. (2012) Radial nerve cord protein phosphorylation dynamics during starfish arm tip wound healing events, Electrophoresis 33(24): 3764-3778.
  74. Freire M. G., Claudio A. F. M., Araujo J. M. M., Coutinho J. A. P., Marrucho I. M., Lopes J. N. C. and Rebelo L. P. N. (2012) Aqueous biphasic systems: a boost brought about by using ionic liquids, Chemical Society Reviews 41(14): 4966-4995.
  75. Freire M. G., Neves C. M. S. S., Lopes J. N. C., Marrucho I. M., Coutinho J. A. P. and Rebelo L. P. N. (2012) Impact of self-aggregation on the formation of ionic-liquid-based aqueous biphasic systems, Journal of Physical Chemistry B 116(26): 7660-7668.
  76. Freire M. G., Pereira J. F. B., Francisco M., Rodriguez H., Rebelo L. P. N., Rogers R. D. and Coutinho J. A. P. (2012) Insight into the interactions that control the phase behaviour of new aqueous biphasic systems composed of polyethylene glycol polymers and ionic liquids, Chemistry-a European Journal 18(6): 1831-1839.
  77. Freire M. G., Teles A. R. R., Lopes J. N. C., Rebelo L. P. N., Marrucho I. M. and Coutinho J. A. P. (2012) Partition coefficients of alkaloids in biphasic ionic-liquid-aqueous systems and their dependence on the hofmeister series, Separation Science and Technology 47(2): 284-291.
  78. Gamelas C. A., Gomes A. C., Bruno S. M., Paz F. A. A., Valente A. A., Pillinger M., Romao C. C. and Goncalves I. S. (2012) Molybdenum(VI) catalysts obtained from eta(3)-allyl dicarbonyl precursors: Synthesis, characterization and catalytic performance in cyclooctene epoxidation, Dalton Transactions 41(12): 3474-3484.
  79. Gamelas C. A., Neves P., Gomes A. C., Valente A. A., Romao C. C., Goncalves I. S. and Pillinger M. (2012) Molybdenum(II) diiodo-tricarbonyl complexes containing nitrogen donor ligands as catalyst precursors for the epoxidation of methyl oleate, Catalysis Letters 142(10): 1218-1224.
  80. Gardete S., Kim C., Hartmann B. M., Mwangi M., Roux C. M., Dunman P. M., Chambers H. F. and Tomasz A. (2012) Genetic pathway in acquisition and loss of vancomycin resistance in a methicillin resistant Staphylococcus aureus (MRSA) strain of clonal type USA300, Plos Pathogens 8(2): e1002505.
  81. Gaspar F. B., Montero N., Akary E., Teixeira N., Matos R., Gonzalez-Zorn B., Crespo M. T. B., Serror P. and Lopes M. D. S. (2012) Incongruence between the cps type 2 genotype and host-related phenotypes of an Enterococcus faecalis food isolate, International Journal of Food Microbiology 158(2): 120-125.
  82. Gomes C. M. (2012) Protein misfolding in disease and small molecule therapies, Current Topics in Medicinal Chemistry12(22): 2460-2469
  83. Gomes R. A., Franco C., Da Costa G., Planchon S., Renaut J., Ribeiro R. M., Pinto F., Silva M. S., Coelho A. V., Freire A. P. and Cordeiro C. (2012) The proteome response to amyloid protein expression in vivo, PLoS ONE 7(11): ARTe50123.
  84. Goncalves A. M. D., Silva C. S., Madeira T. I., Coelho R., de Sanctis D., San Romao M. V. and Bento I. (2012) Endo-beta-D-1,4-mannanase from Chrysonilia sitophila displays a novel loop arrangement for substrate selectivity, Acta Crystallographica Section D-Biological Crystallography 68: 1468-1478.
  85. Goncalves L. G., Borges N., Serra F., Fernandes P. L., Dopazo H. and Santos H. (2012) Evolution of the biosynthesis of di-myo-inositol phosphate, a marker of adaptation to hot marine environments, Environmental Microbiology 14(3): 691-701.
  86. Goncalves S., Miller S. P., Carrondo M. A., Dean A. M. and Matias P. M. (2012) Induced fit and the catalytic mechanism of isocitrate dehydrogenase, Biochemistry 51(36): 7098-7115.
  87. Gordo J., Maximo P., Cabrita E., Lourenco A., Oliva A., Almeida J., Filipe M., Cruz P., Barcia R., Santos M. and Cruz H. (2012) Thymus mastichina: chemical constituents and their anti-cancer activity, Natural Product Communications 7(11): 1491-1494.
  88. Gordon R. J., Miragaia M., Weinberg A. D., Lee C. J., Rolo J., Giacalone J. C., Slaughter M. S., Pappas P., Naka Y., Tector A. J., de Lencastre H. and Lowy F. D. (2012) Staphylococcus epidermidis colonization is highly clonal across US cardiac centers, Journal of Infectious Diseases 205(9): 1391-1398.
  89. Gouveia R., Schaffer L., Papp S., Grammel N., Kandzia S., Head S. R., Kleene R., Schachner M., Conradt H. S. and Costa J. (2012) Expression of glycogenes in differentiating human NT2N neurons. Downregulation of fucosyltransferase 9 leads to decreased Lewis(x) levels and impaired neurite outgrowth, Biochimica Et Biophysica Acta-General Subjects 1820(12): 2007-2019.
  90. Guerreiro A., da Costa G., Gomes R. A., Ribeiro-Silva C., Gilberto S., Mateus E., Monteiro E., Barroso E., Coelho A. V., Freire A. P. and Cordeiro C. (2012) alpha-Synuclein aggregation in the saliva of familial transthyretin amyloidosis: a potential biomarker, Amyloid-Journal of Protein Folding Disorders 19(2): 74-80.
  91. Guerreiro I., Casaca A., Nunes A., Monteiro S., Novoa A., Ferreira R. B., Bom J. and Mallo M. (2012) Regulatory role for a conserved motif adjacent to the homeodomain of Hox10 proteins, Development 139(15): 2703-2710.
  92. Guinote I. B., Moreira R. N., Freire P. and Arraiano C. M. (2012) Characterization of the BolA homolog IbaG: a new gene involved in acid resistance, Journal of Microbiology and Biotechnology 22(4): 484-493.
  93. Gyorgy E., del Pino A. P., Roqueta J., Ballesteros B., Miguel A. S., Maycock C. and Oliva A. G. (2012) Synthesis and characterization of CdSe/ZnS core-shell quantum dots immobilized on solid substrates through laser irradiation, Physica Status Solidi a-Applications and Materials Science 209(11): 2201-2207.
  94. Hu F. Z., Eutsey R., Ahmed A., Frazao N., Powell E., Hiller N. L., Hillman T., Buchinsky F. J., Boissy R., Janto B., Kress-Bennett J., Longwell M., Ezzo S., Post J. C., Nesin M., Tomasz A. and Ehrlich G. D. (2012) In Vivo Capsular Switch in Streptococcus pneumoniae - Analysis by Whole Genome Sequencing, PLoS ONE 7(11): ARTe47983.
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  195. Seixas E., Ramalho J. S., Mota L. J., Barral D. C. and Seabra M. C. (2012) Bacteria and protozoa differentially modulate the expression of Rab proteins, PLoS ONE 7(7): e39858.
  196. Seixas S., Ivanova N., Ferreira Z., Rocha J. and Victor B. L. (2012) Loss and gain of function in SERPINB11: an example of a gene under selection on standing variation, with implications for host-pathogen interactions, PLoS ONE 7(2): e32518.
  197. Serra A. T., Rocha J., Sepodes B., Matias A. A., Feliciano R. P., de Carvalho A., Bronze M. R., Duarte C. M. M. and Figueira M. E. (2012) Evaluation of cardiovascular protective effect of different apple varieties - correlation of response with composition, Food Chemistry 135(4): 2378-2386.
  198. Serra M., Brito C., Correia C. and Alves P. M. (2012) Process engineering of human pluripotent stem cells for clinical application, Trends in Biotechnology 30(6): 350-359.
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  200. Shimizu K., Pensado A., Malfreyt P., Padua A. A. H. and Lopes J. N. C. (2012) 2D or not 2D: structural and charge ordering at the solid-liquid interface of the 1-(2-hydroxyethyl)-3-methylimidazolium tetrafluoroborate ionic liquid, Faraday Discussions 154: 155-169.
  201. Silva A. F., Carvalho G., Oehmen A., Lousada-Ferreira M., van Nieuwenhuijzen A., Reis M. A. M. and Crespo M. T. B. (2012) Microbial population analysis of nutrient removal-related organisms in membrane bioreactors, Applied Microbiology and Biotechnology 93(5): 2171-2180.
  202. Silva A. F., Carvalho G., Soares R., Coelho A. V. and Crespo M. T. B. (2012) Step-by-step strategy for protein enrichment and proteome characterisation of extracellular polymeric substances in wastewater treatment systems, Applied Microbiology and Biotechnology 95(3): 767-776.
  203. Silva C. S., Damas J. M., Chen Z. J., Brissos V., Martins L. O., Soares C. M., Lindley P. F. and Bento I. (2012) The role of Asp116 in the reductive cleavage of dioxygen to water in CotA laccase: assistance during the proton-transfer mechanism, Acta Crystallographica Section D-Biological Crystallography 68: 186-193.
  204. Silva C. S., Durao P., Fillat A., Lindley P. F., Martins L. O. and Bento I. (2012) Crystal structure of the multicopper oxidase from the pathogenic bacterium Campylobacter jejuni CGUG11284: characterization of a metallo-oxidase, Metallomics 4(1): 37-47.
  205. Silva M. A., Lucas T. G., Salgueiro C. A. and Gomes C. M. (2012) Protein Folding Modulates the Swapped Dimerization Mechanism of Methyl-Accepting Chemotaxis Heme Sensors, PLoS ONE 7(9): e46328.
  206. Silva S., Frazao O., Santos J. L. and Malcata F. X. (2012) A reflective optical fiber refractometer based on multimode interference, Sensors and Actuators B-Chemical 161(1): 88-92.
  207. Silva S., Pachon E. G. P., Franco M. A. R., Hayashi J. G., Malcata F. X., Frazao O., Jorge P. and Cordeiro C. M. B. (2012) Ultrahigh-sensitivity temperature fiber sensor based on multimode interference, Applied Optics 51(16): 3236-3242.
  208. Silva S., Pachon E. G. P., Franco M. A. R., Jorge P., Santos J. L., Malcata F. X., Cordeiro C. M. B. and Frazao O. (2012) Curvature and temperature discrimination using multimode interference fiber optic structures-a proof of concept, Journal of Lightwave Technology 30(23): 3569-3575.
  209. Silva S. F., Coelho L., Frazao O., Santos J. L. and Malcata F. X. (2012) A Review of palladium-based fiber-optic sensors for molecular hydrogen detection, Ieee Sensors Journal 12(1): 93-102.
  210. da Silva S. M., Pacheco I. and Pereira I. A. C. (2012) Electron transfer between periplasmic formate dehydrogenase and cytochromes c in Desulfovibrio desulfuricans ATCC 27774, Journal of Biological Inorganic Chemistry 17(5): 831-838.
  211. Soares C. M. and Baptista A. M. (2012) Simulation of multihaem cytochromes, Febs Letters 586(5): 510-518.
  212. Soares R., Franco C., Pires E., Ventosa M., Palhinhas R., Koci K., de Almeida A. M. and Coelho A. V. (2012) Mass spectrometry and animal science: protein identification strategies and particularities of farm animal species, Journal of Proteomics 75(14): 4190-4206.
  213. Solopova A., Bachmann H., Teusink B., Kok J., Neves A. R. and Kuipers O. P. (2012) A specific mutation in the promoter region of the silent cel cluster accounts for the appearance of lactose-utilizing Lactococcus lactis MG1363, Applied and Environmental Microbiology 78(16): 5612-5621.
  214. Sousa F. L., Alves R. J., Ribeiro M. A., Pereira-Leal J. B., Teixeira M. and Pereira M. M. (2012) The superfamily of heme-copper oxygen reductases: types and evolutionary considerations, Biochimica Et Biophysica Acta-Bioenergetics 1817(4): 629-637.
  215. de Sousa H. C., Costa M. S., Coimbra P., Matias A. A. and Duarte C. M. M. (2012) Experimental determination and correlation of meloxicam sodium salt solubility in supercritical carbon dioxide, Journal of Supercritical Fluids 63: 40-45.
  216. Sousa P. M. F., Videira M. A. M., Bohn A., Hood B. L., Conrads T. P., Goulao L. F. and Melo A. M. P. (2012) The aerobic respiratory chain of Escherichia coli: from genes to supercomplexes, Microbiology-Sgm 158: 2408-2418.
  217. Sousa S. C. A., Bernardo J. R., Romao C. C. and Fernandes A. C. (2012) Highly efficient rhenium-catalyzed deoxygenation of sulfoxides without adding any reducing agent, Tetrahedron 68(39): 8194-8197.
  218. Spring S., Visser M., Lu M., Copeland A., Lapidus A., Lucas S., Cheng J. F., Han C., Tapia R., Goodwin L. A., Pitluck S., Ivanova N., Land M., Hauser L., Larimer F., Rohde M., Goker M., Detter J. C., Kyrpides N. C., Woyke T., Schaap P. J., Plugge C. M., Muyzer G., Kuever J., Pereira I. A., Parshina S. N., Bernier-Latmani R., Stams A. J. and Klenk H. P. (2012) Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)), Standards in Genomic Science 7(2): 304-19.
  219. Stockdreher Y., Venceslau S. S., Josten M., Sahl H. G., Pereira I. A. C. and Dahl C. (2012) Cytoplasmic sulfurtransferases in the purple sulfur bacterium Allochromatium vinosum: evidence for sulfur transfer from DsrEFH to DsrC, PLoS ONE 7(7): e40785.
  220. Tan C. M., Therien A. G., Lu J., Lee S. H., Caron A., Gill C. J., Lebeau-Jacob C., Benton-Perdomo L., Monteiro J. M., Pereira P. M., Elsen N. L., Wu J., Deschamps K., Petcu M., Wong S., Daigneault E., Kramer S., Liang L. Z., Maxwell E., Claveau D., Vaillancourt J., Skorey K., Tam J., Wang H., Meredith T. C., Sillaots S., Wang-Jarantow L., Ramtohul Y., Langlois E., Landry F., Reid J. C., Parthasarathy G., Sharma S., Baryshnikova A., Lumb K. J., Pinho M. G., Soisson S. M. and Roemer T. (2012) Restoring methicillin-resistant Staphylococcus aureus susceptibility to beta-lactam antibiotics, Science Translational Medicine 4(126).
  221. Tariq M., Freire M. G., Saramago B., Coutinho J. A. P., Lopes J. N. C. and Rebelo L. P. N. (2012) Surface tension of ionic liquids and ionic liquid solutions, Chemical Society Reviews 41(2): 829-868.
  222. Tavares A. F. N., Nobre L. S. and Saraiva L. M. (2012) A role for reactive oxygen species in the antibacterial properties of carbon monoxide-releasing molecules, Fems Microbiology Letters 336(1): 1-10.
  223. Tavares L., Figueira I., Macedo D., McDougall G. J., Leitao M. C., Vieira H. L. A., Stewart D., Alves P. M., Ferreira R. B. and Santos C. N. (2012) Neuroprotective effect of blackberry (Rubus sp.) polyphenols is potentiated after simulated gastrointestinal digestion, Food Chemistry 131(4): 1443-1452.
  224. Tavares L., Fortalezas S., Tyagi M., Barata D., Serra A. T., Maria C., Duarte M., Duarte R. O., Feliciano R. P., Bronze M. R., Espirito-Santo M. D., Ferreira R. B. and Santos C. N. (2012) Bioactive compounds from endemic plants of Southwest Portugal: Inhibition of acetylcholinesterase and radical scavenging activities, Pharmaceutical Biology 50(2): 239-246.
  225. Tavares L., McDougall G. J., Fortalezas S., Stewart D., Ferreira R. B. and Santos C. N. (2012) The neuroprotective potential of phenolic-enriched fractions from four juniperus species found in Portugal, Food Chemistry 135(2): 562-570.
  226. Tavares T., Sevilla M. A., Montero M. J., Carron R. and Malcata F. X. (2012) Acute effect of whey peptides upon blood pressure of hypertensive rats, and relationship with their angiotensin-converting enzyme inhibitory activity, Molecular Nutrition & Food Research 56(2): 316-324.
  227. Tavares T. G., Amorim M., Comes D., Pintado M. E., Pereira C. D. and Malcata F. X. (2012) Manufacture of bioactive peptide-rich concentrates from whey: characterization of pilot process, Journal of Food Engineering 110(4): 547-552.
  228. Tavares T. G. and Malcata F. X. (2012) The Portuguese paradox: why do some inhabitants of Portugal appear to live so long when their diet is based on whey cheese?, Food Chemistry 131(3): 727-729.
  229. Teixeira N., Santos S., Marujo P., Yokohata R., Iyer V. S., Nakayama J., Hancock L. E., Serror P. and Lopes M. D. S. (2012) The incongruent gelatinase genotype and phenotype in Enterococcus faecalis are due to shutting off the ability to respond to the gelatinase biosynthesis-activating pheromone (GBAP) quorum-sensing signal, Microbiology-Sgm 158: 519-528.
  230. Todorovic S., Rodrigues M. L., Matos D. and Pereira I. A. C. (2012) Redox properties of lysine- and methionine-coordinated hemes ensure downhill electron transfer in NrfH(2)A(4) nitrite reductase, Journal of Physical Chemistry B 116(19): 5637-5643.
  231. Tostoes R. M., Leite S. B., Serra M., Jensen J., Bjorquist P., Carrondo M. J. T., Brito C. and Alves P. M. (2012) Human liver cell spheroids in extended perfusion bioreactor culture for repeated-dose drug testing, Hepatology 55(4): 1227-1236.
  232. Turner D. L. and Catarino T. (2012) Homotropic and heterotropic interactions in cytochromes c(3) from sulphate reducing bacteria, Febs Letters 586(5): 494-503.
  233. Utesch T., Sezer M., Weidinger I. M. and Mroginski M. A. (2012) Adsorption of sulfite oxidase on self-assembled mono layers from molecular dynamics simulations, Langmuir 28(13): 5761-5769.
  234. Valente A., Bronze M. R., Bicho M., Duarte R. and Costa H. S. (2012) Validation and clinical application of an UHPLC method for simultaneous analysis of total homocysteine and cysteine in human plasma, Journal of Separation Science 35(24): 3427-3433.
  235. Valente C., De Lencastre H. and Sa-Leao R. (2012) Pherotypes of co-colonizing Pneumococci among portuguese children, Microbial Drug Resistance 18(6): 550-554.
  236. Valente C., Hinds J., Pinto F., Brugger S. D., Gould K., Muhlemann K., de Lencastre H. and Sa-Leao R. (2012) Decrease in Pneumococcal co-colonization following vaccination with the seven-valent Pneumococcal conjugate vaccine, PLoS ONE 7(1): e30235.
  237. Valerio J., Lameiro M. H., Funari S. S., Moreno M. J. and Melo E. (2012) Temperature effect on the bilayer stacking in multilamellar lipid vesicles, Journal of Physical Chemistry B 116(1): 168-178.
  238. Vapa I., Torres V. M., Djordjevic A., Vasovic V., Srdjenovic B., Simic V. D. and Popovic J. K. (2012) Effect of fullerenol C-60(OH)(24) on lipid peroxidation of kidneys, testes and lungs in rats treated with doxorubicine, European Journal of Drug Metabolism and Pharmacokinetics 37(4): 301-307.
  239. Vaz M., Cochard H., Gazarini L., Graca J., Chaves M. M. and Pereira J. S. (2012) Cork oak (Quercus suber L.) seedlings acclimate to elevated CO2 and water stress: photosynthesis, growth, wood anatomy and hydraulic conductivity, Trees-Structure and Function 26(4): 1145-1157.
  240. Veith A., Botelho H. M., Kindinger F., Gomes C. M. and Kletzin A. (2012) The sulfur oxygenase reductase from the mesophilic bacterium Halothiobacillus neapolitanus is a highly active thermozyme, Journal of Bacteriology 194(3): 677-685.
  241. Ventura M., Mosquera M. E. G., Cuenca T., Royo B. and Jimenez G. (2012) Cyclopentadienyl-silsesquioxane titanium complexes: highly active catalysts for epoxidation of alkenes with aqueous hydrogen peroxide, Inorganic Chemistry 51(11): 6345-6349.
  242. Vicente A. I., Caio J. M., Sardinha J., Moiteiro C., Delgado R. and Felix V. (2012) Evaluation of the binding ability of tetraaza 2 arene 2 triazine receptors anchoring L-alanine units for aromatic carboxylate anions, Tetrahedron 68(2): 670-680.
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  244. Victor B. L., Baptista A. M. and Soares C. M. (2012) Structural determinants for the membrane insertion of the transmembrane peptide of hemagglutinin from influenza virus, Journal of Chemical Information and Modeling 52(11): 3001-3012.
  245. Vilares I., Howard J. D., Fernandes H. L., Gottfried J. A. and Kording K. P. (2012) Differential representations of prior and likelihood uncertainty in the human brain, Current Biology 22(18): 1641-1648.
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  247. Wang Y., Loers G., Pan H. C., Gouveia R., Zhao W. J., Shen Y. Q., Kleene R., Costa J. and Schachner M. (2012) Antibody fragments directed against different portions of the human neural cell adhesion molecule L1 act as inhibitors or activators of L1 function, PLoS ONE 7(12): ARTe52404.
  248. Wey D., Bohn A. and Menna-Barreto L. (2012) Daily rhythms of native Brazilians in summer and winter, Physiology & Behavior 105(3): 613-620.
  249. Yata P. K., Shilpa M., Nagababu P., Reddy M. R., Kotha L. R., Gabra N. M. and Satyanarayana S. (2012) Study of DNA light switch Ru(II) complexes: synthesis, characterization, photocleavage and antimicrobial activity, Journal of Fluorescence 22(3): 835-847.
  250. Zarrouk O., Francisco R., Pinto-Marijuan M., Brossa R., Santos R. R., Pinheiro C., Costa J. M., Lopes C. and Chaves M. M. (2012) Impact of irrigation regime on berry development and flavonoids composition in Aragonez (Syn. Tempranillo) grapevine, Agricultural Water Management 114: 18-29.
  251. Zidaric V., Pardon B., dos Vultos T., Deprez P., Brouwer M. S. M., Roberts A. P., Henriques A. O. and Rupnik M. (2012) Different antibiotic resistance and sporulation properties within multiclonal clostridium difficile PCR ribotypes 078, 126, and 033 in a single calf farm, Applied and Environmental Microbiology 78(24): 8515-8522.


Articles not indexed in ISI

  1. Cmoch, P. Groves, M. Palczewska and S Pikuła (2012) S100A proteins in propagation of a calcium signal in norm and pathology, Postepy Biochemii, 58(4): 429-436.
  2. Ferreira, R.B., Monteiro, S. (2012) Tanino polimerase – Apenas mais um exemplo da necessidade de entendimento entre investigadores e empresários para a resolução de problemas da nossa sociedade,  Revista da Associação Portuguesa de Horticultura,pp 32-35, Enovitis
  3. Matos R. G., Barria C., Pobre V., Andrade J. M. and Arraiano C. M. (2012) Exoribonucleases as modulators of virulence in pathogenic bacteria, Frontiers in Cellular and Infection Microbiology 2: 65.
  4. Monteiro F., Carinhas N., Carrondo M. J. T., Bernal V. and Alves P. M. (2012) Towards system-level understanding of baculovirus host cell interactions: from molecular fundamental studies to large-scale proteomics approaches, Frontiers in Microbiology 3: ART391.
  5. Pinto D., Ruivo M., Vandamme P. and Lopes M. F. S. (2012)Hospital-adapted clonal complex 17 Enterococcus Faecium found among sand Enterococcal isolates, Journal of Environmental Protection 3(1): 74-82.
  6. Queiroga C. S. F., Almeida A. S. and Vieira H. L. A. (2012)Carbon monoxide targeting mitochondria, Biochemistry Research International 2012: ART749845.
  7. Ramos A. R., Keller K. L., Wall J. D. and Pereira I. A. C.(2012) The membrane QmoABC complex interacts directly with the dissimilatory adenosine 5´-phosphosulfate reductase in sulfate reducing bacteria, Frontiers in Microbiology 3: ART137.
  8. Veiga H. and Pinho M. G. (2012) Bacterial cell division: what it takes to divide a prokaryotic cell, Canal BQ9: 18-26.


Book Chapters

  1. Bandeira, V., Peixoto, C., Coroadinha, A.S., Cruz, P.E., Carrondo, M.J.T., Merten, O.-W., Alves, PA. (2012)  Facing the challenges of downstream processing of lentiviral vectors In The CliniBook: Clinical gene transfer ( Odile Cohen-HaguenauerEd) EDK, Paris
  2. Botelho, H, M. Fritz, G., and Gomes, C. M. (2012) Analysis of S100 Oligomers and Amyloids. in Amyloid Proteins: Methods and Protocols (Sigurdsson, E. M., Calero, M., and Gasset, M. Eds.) pp  373-386   ,Springer Science+Business Media, USA; New York,
  3. Brito D., Serrano C., Peres C., Peres F., Oleastro M. and Monteiro L. (2012) Lactobacilli from fermented portuguese table-olives are able to inhibit the human pathogen Helicobacter pylori, In Acta Horticulturae (E. M. Sampaio and A. C. Pinheiro, Eds.), pp 463-468, International Society for Horticultural Science, Évora
  4. Chaves MM, Zarrouk O. (2012) Crop Responses to Available Soil Water in Encyclopedia of Sustainability Science and Technology, (Robert A. Meyers  Ed),Springer Science
  5. Chaves, MM, Flexas J, Gulías J, Loreto F and Medrano H. (2012) Photosynthesis under water deficits, flooding and salinity In Ecophysiology of photosynthesis in terrestrial higher plants, (J Flexas, F Loreto & H Medrano Eds.), pp 299-311, Cambridge University Press. Cambridge. UK
  6. Coroadinha, A.S., Wirth, D., Rodrigues, A.F., Gama-Norton, L., Duros, C., Cohen-Haguenauer, O., Alves, P.A., Cruz, P.E., Carrondo, M.J.T., Hauser, H. (2012)  Modular retroviral producer cell lines in The CliniBook: Clinical gene transfer, (Odile Cohen-Haguenauer Eds)– EDK, Paris France
  7. Cunha C. and Coelho A. V. (2012) Comparative proteome analysis of a human liver cell line stably transfected with Hepatitis D virus full-length cDNA, In Liver proteomics: methods and protocols (D. Josic  and D. C. Hixxon, Eds.), Humana Press
  8. Ghabbour N., Lamzira A. Z., Thonart P., Peres C. M., Markaoui M. and Asehraou A. (2012) Oleuropein biodegradation by lactic acid bacteria isolated from table olives, In Acta Horticulturae (E. M. Sampaio and A. C. Pinheiro, Eds.), pp 533-536, International Society for Horticultural Science, Évora
  9. Henriques. B, J.Rodrigues, J. V., and Gomes, C. M. (2012) Riboflavin and beta-oxidation Flavoenzymes  In B Vitamins and Folate: Chemistry, Analysis, Function and Effects, (Victor R Preedy Ed) pp 611-632, The Royal Society of Chemistry
  10. L.L. Pimentel, M.E. Pintado, F.X. Malcata, R. Tenreiro, T. Semedo-Lemsaddek and M.T. Barreto Crespo. (2012) Introduction: a journey to the world of Enterococcu In Enterococcus and safety, (T. Semedo-Lemsaddek, M.T. Barreto-Crespo and R. Tenreiro Eds.), pp 1-4, Series Advances in Food Safety and Food Microbiology, Nova Science Publishers, NY, USA
  11. Lobo S. A. L., Warren M. J. and Saraiva L. M. (2012) Sulfate-reducing bacteria reveal a new branch of tetrapyrrole metabolism, In Advances in Bacterial Respiratory Physiology, pp 267-95, Academic Press (Advances in Microbial Physiology 61)
  12. Lopes, MFS, Carrilero, L, Gonzalez-Zorn, B (2012) Post-genomic strategies towards evaluation of pathogenicity potential, in Enterococcus and Safety, (T Semedo-Lemsaddek, T Crespo and R Tenreiro Eds.), Nova Science Publishers
  13. Loureiro V, Ferreira MM, Monteiro S and Ferreira RB (2012) The Microbial Community of Grape Berry in The Biochemistry of the Grape Berry,(Gerós H, Chaves MM and Delrot S Eds.), pp. 241-268, Bentham Science Publishers
  14. M.T. Barreto Crespo and P.I. Alves. (2012) Enterococci in food in Enterococcus and safety, (T. Semedo-Lemsaddek, M.T. Barreto-Crespo and R. Tenreiro Eds), pp 389-405, Series Advances in Food Safety and Food Microbiology, Nova Science Publishers, NY, USA
  15. M.T. Barreto Crespo, R. Tenreiro and T. Semedo-Lemsaddek. (2012) Closing remarks: potential risks of enterococci to food safety regarding the 21ST century challenges in Enterococcus and safety, (T. Semedo-Lemsaddek, M.T. Barreto-Crespo and R. Tenreiro Eds.), 509-511, Series Advances in Food Safety and Food Microbiology, Nova Science Publishers, NY, USA.
  16. Maria Rosário Bronze, Catarina M. M. Duarte, Ana Matias.(2012)  Stilbenes and Resveratrol in Handbook of Analysis of Active Compounds in Functional Foods,( Leo M. L. Nollet and Fidel Toldrá Eds.), CRC Press,
  17. Medrano, H, Gulías, J, Chaves, MM, Galmés, J, Flexas J. (2012), Photosynthetic water use efficiency  In Ecophysiology of photosynthesis in terrestrial higher plants ,(J Flexas, F Loreto & H Medrano Eds) pp 523-545, Cambridge University Press. Cambridge. UK,
  18. Miguel A. S., Maycock C. D. and Oliva A. G. (2012) Synthesis and functionalization of CdSe/ZnS QDs using the successive ion layer adsorption reaction and mercaptopropionic acid phase transfer methods, In Nanoparticles in Biology and Medicine : Methods and Protocols (M. Soloviev, Ed.), pp 143-55, Humana Press, Clifton, N.J (Methods in molecular biology 906)
  19. Oliveira, D. C., H. de Lencastre and A. Tomasz. (2012) Evolution of Molecular Techniques for the Characterization of MRSA Clones in Antibiotic Discovery and Development (T. Dougherty and M. Puci Eds.) pp. 571- 592, Springer Verlag
  20. Peres C. M., Peres C. and Malcata F. X. (2012) Table olives in Mediterranean regions: economics, sustainability and environmental considerations focused on a traditional food supply chain, In Food supply: economics, sustainability and environmental effects (B. P. Hendriks, Ed.), Nova Science Publishers, Hauppauge NY, USA (Agricultural Research Updates)
  21. Pessanha, M. and Archer, M. (2012) Membranas biológicas, In Biologia Celular e Molecular (Sunkel,C. and  Azevedo, C. Eds.), pp 43-57, Lidel, Portugal
  22. Pintado C. J. M., Catulo L., Peres C. and Peres F. (2012) Oleuropein biodegradation by lactic acid bacteria isolated from table olives, In Acta Horticulturae (E. M. Sampaio and A. C. Pinheiro, Eds.), pp 469-473, International Society for Horticultural Science, Évora
  23. Romão C. V., Archer M., Lobo S. A., Louro R. O., Pereira I. A. C., Saraiva L. M., Teixeira M. and Matias P. M. (2012) Diversity of heme proteins in sulfate reducing bacteria, In Handbook of porphyrin science: with applications to chemistry, physics, materials Science, engineering, biology and medicine (K. M. Kadish et al., Eds.), pp 139-230, World Scientific Publishing Co. Pte. Ltd., Singapore
  24. S. Gorynia, T. M. Bandeiras, P. M. Matias, F. G. Pinho, C. E. McVey, P. Donner and M. A. Carrondo. (2012) RuvBL1 and RuvBL2 and Their Complex Proteins Implicated in Many Cellular Pathways in Macromolecular Crystallography,( M. A. Carrondo and P. Spadon, Eds.), pp 55-63, Springer, Dordrecht, The Netherlands
  25. S. Sanches, J. Ricardo, M.C. Leitão, M.T. Barreto Crespo, V.J. Pereira. 2012. Determination of Polycyclic Aromatic Hydrocarbons in Drinking Water Sources in Handbook of Polycyclic Aromatic Hydrocarbons: Chemistry, Occurrence and Health Issues, (G.C. Bandeira and H.E. Meneses Eds.), Nova Science Publishers, NY, USA
  26. Santos A. R., Miguel A. S., Fevereiro P. and Oliva A. G. (2012) Evaluation of cytotoxicity of 3-mercaptopropionic acid-modified quantum dots on Medicago sativa cells and tissues, In Nanoparticles in Biology and Medicine : Methods and Protocols (M. Soloviev, Ed.), pp 435-49, Humana Press, Clifton, N.J. (Methods in molecular biology 906)
  27. Santos F. L., F. M.-R., Cordeiro A. M. and Peres C. (2012) Following olive footprints in Portugal, In Following olive footprints (Olea europaea L.) - cultivation and culture, folklore and history, tradition and uses (M. EL-KHOLY, Ed.), pp 320-330, International Society for Horticultural Science (Scripta Horticulturae 13)
  28. Soares R, Pires E, Almeida AM, Santos R, Gomes R, Koči K, Franco CF, Coelho AV.( 2012 ) Tandem Mass Spectrometry of peptides, In Applications of Tandem Mass Spectrometry- its Principles and Applications, (Jeevan K. Prasain Ed.), InTech
  29. Tyrman SD, Chaves M, Barrieu F. (2012),  Water Relations of the grape berry and aquaporins In The Biochemistry of the Grape Berry (H. Gerós, M. Chaves, S. Delrot Eds.), pp 3-22, Bentham Science Publishers,
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