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ITQB articles published in 2013

Articles indexed in ISI Web of Science

  1. Abecasis, A. B., Serrano, M., Alves, R., Quintais, L., Pereira-Leal, J. B., & Henriques, A. O. (2013). A Genomic Signature and the Identification of New Sporulation Genes. Journal of Bacteriology, 195(9), 2101-2115. doi:10.1128/jb.02110-12
  2. Abrantes, M. C., Kok, J., & Lopes, M. D. (2013). EfaR Is a Major Regulator of Enterococcus faecalis Manganese Transporters and Influences Processes Involved in Host Colonization and Infection. Infection and Immunity, 81(3), 935-944.  doi:10.1128/iai.06377-11
  3. Abreu, I. A., Farinha, A. P., Negrao, S., Goncalves, N., Fonseca, C., Rodrigues, M., Baptista R, Saibo NJM, Oliveira, M. M. (2013). Coping with abiotic stress: Proteome changes for crop improvement. Journal of Proteomics, 93, 145-168.   doi:10.1016/j.jprot.2013.07.014
  4. Albuquerque, M. G. E., Carvalho, G., Kragelund, C., Silva, A. F., Crespo, M. T. B., Reis, M. A. M., & Nielsen, P. H. (2013). Link between microbial composition and carbon substrate-uptake preferences in a PHA-storing community. Isme Journal, 7(1), 1-12. doi:10.1038/ismej.2012.74
  5. Almeida, A. P., Rodriguez-Rojo, S., Serra, A. T., Vila-Real, H., Simplicio, A. L., Delgadilho, I., da Costa, S.B., da Costa, L.B., Nogueira, I.D., Duarte, C. M. M. (2013). Microencapsulation of oregano essential oil in starch-based materials using supercritical fluid technology. Innovative Food Science & Emerging Technologies, 20, 140-145. doi:10.1016/j.ifset.2013.07.009
  6. Almeida, B., Kjeldal, H., Lolas, I., Knudsen, A. D., Carvalho, G., Nielsen, K. L., Crespo, M.T.B., Stensballe, A., Nielsen, J. L. (2013). Quantitative proteomic analysis of ibuprofen-degrading Patulibacter sp strain I11. Biodegradation, 24(5), 615-630. doi:10.1007/s10532-012-9610-5
  7. Almeida, B., Oehmen, A., Marques, R., Brito, D., Carvalho, G., & Crespo, M. T. B. (2013). Modelling the biodegradation of non-steroidal anti-inflammatory drugs (NSAIDs) by activated sludge and a pure culture. Bioresource Technology, 133, 31-37.  doi:10.1016/j.biortech.2013.01.035
  8. Almeida, B., Vaz-Moreira, K., Schumann, P., Nunes, O. C., Carvalho, G., & Crespo, M. T. B. (2013). Patulibacter medicamentivorans sp nov., isolated from activated sludge of a wastewater treatment plant. International Journal of Systematic and Evolutionary Microbiology, 63, 2588-2593. doi: 10.1099/ijs.0.047522-0
  9. Almeida, J. E., Ferreira, P., Alves, P., Lopes, A., & Gil, M. H. (2013). Synthesis of a dextran based thermo-sensitive drug delivery system by gamma irradiation. International Journal of Biological Macromolecules, 61, 150-155.  doi:10.1016/j.ijbiomac.2013.07.002
  10. Almeida, S. T., de Lencastre, H., & Sa-Leao, R. (2013). Epidemiology and Population Structure of Serotypes 1, 5 and 7F Carried by Children in Portugal from 1996-2010 before Introduction of the 10-Valent and 13-Valent Pneumococcal Conjugate Vaccines. Plos One, 8(9). doi: 10.1371/journal.pone.0075442
  11. Alves, F., Oliveira, F. S., Schroder, B., Matos, C., & Marrucho, I. M. (2013). Synthesis, characterization, and liposome partition of a novel tetracycline derivative using the ionic liquids framework. Journal of Pharmaceutical Sciences, 102(5), 1504-1512.  doi:10.1002/jps.23487
  12. Alves, S. P., Bessa, R. J. B., Quaresma, M. A. G., Kilminster, T., Scanlon, T., Oldham, C., Milton, J., Greeff, J., Almeida, A. M. (2013). Does the Fat Tailed Damara Ovine Breed Have a Distinct Lipid Metabolism Leading to a High Concentration of Branched Chain Fatty Acids in Tissues? Plos One, 8(10), 9. doi:10.1371/journal.pone.0077313
  13. Amaral, C., Pimentel, C., Matos, R. G., Arraiano, C. M., Matzapetakis, M., & Rodrigues-Pousada, C. (2013). Two Residues in the Basic Region of the Yeast Transcription Factor Yap8 Are Crucial for Its DNA-Binding Specificity. Plos One, 8(12), 12.                     doi:10.1371/journal.pone.0083328
  14. Andrade, J. M., Pobre, V., & Arraiano, C. M. (2013). Small RNA Modules Confer Different Stabilities and Interact Differently with Multiple Targets. Plos One, 8(1), 15. doi:10.1371/journal.pone.0052866
  15. Araujo, J. M. M., Pereiro, A. B., Alves, F., Marrucho, I. M., & Rebelo, L. P. N. (2013). Nucleic acid bases in 1-alkyl-3-methylimidazolium acetate ionic liquids: A thermophysical and ionic conductivity analysis. Journal of Chemical Thermodynamics, 57, 1-8. doi:10.1016/j.jct.2012.07.022
  16. Araujo, J. M. M., Pereiro, A. B., Lopes, J. N. C., Rebelo, L. P. N., & Marrucho, I. M. (2013). Hydrogen-Bonding and the Dissolution Mechanism of Uracil in an Acetate Ionic Liquid: New Insights from NMR Spectroscopy and Quantum Chemical Calculations. Journal of Physical Chemistry B, 117(15), 4109-4120. doi:10.1021/jp400749j
  17. Araujo, S. S., Duque, A. S., Silva, J. M., Santos, D., Silva, A. B., & Fevereiro, P. (2013). Water deficit and recovery response of Medicago truncatula plants expressing the ELIP-like DSP22. Biologia Plantarum, 57(1), 159-163.  doi:10.1007/s10535-012-0235-7
  18. Arraiano, C. M., Mauxion, F., Viegas, S. C., Matos, R. G., & Seraphin, B. (2013). Intracellular ribonucleases involved in transcript processing and decay: Precision tools for RNA. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms, 1829(6-7), 491-513. doi:10.1016/j.bbagrm.2013.03.009
  19. Bandeiras, T. M., Freitas, M. C., Petrasch, D., Kletzin, A., & Frazao, C. (2013). SAD phasing towards structure determination of a thermostable Rieske ferredoxin with a novel stabilizing disulfide bridge. Acta Crystallographica Section F-Structural Biology and Crystallization Communications, 69, 555-558. doi:10.1107/s1744309113008385
  20. Barbas, A., Popescu, A., Frazao, C., Arraiano, C. M., & Fialho, A. M. (2013). Rossmann-fold motifs can confer multiple functions to metabolic enzymes: RNA binding and ribonuclease activity of a UDP-glucose dehydrogenase. Biochemical and Biophysical Research Communications, 430(1), 218-224. doi: 10.1016/j.bbrc.2012.10.091
  21. Barria, C., Malecki, M., & Arraiano, C. M. (2013). Bacterial adaptation to cold. Microbiology-Sgm, 159, 2437-2443.     doi:10.1099/mic.0.052209-0
  22. Barros, M. T., Dey, S. S., & Maycock, C. D. (2013). Metal-Free Synthesis of Secondary Arylamines: An Aliphatic-to-Aromatic Transformation. European Journal of Organic Chemistry(4), 742-747. doi: 10.1002/ejoc.201201263
  23. Barros, S. C., Louro, R. O., Micaelo, N. M., Martins, J. A., Marcos, J. C., & Cavaco-Paulo, A. (2013). NMR and molecular modelling studies on elastase inhibitor-peptides for wound management. Reactive & Functional Polymers, 73(10), 1357-1365. doi:10.1016/j.reactfunctpolym.2013.02.011
  24. Bartels, M. D., Boye, K., Oliveira, D. C., Worning, P., Goering, R., & Westh, H. (2013). Associations between dru Types and SCCmec Cassettes. Plos One, 8(4), 6. doi:10.1371/journal.pone.0061860
  25. Batista, A. P., Marreiros, B. C., & Pereira, M. M. (2013). The antiporter-like subunit constituent of the universal adaptor of complex I, group 4 membrane-bound NiFe -hydrogenases and related complexes. Biological Chemistry, 394(5), 659-666.  doi:10.1515/hsz-2012-0342
  26. Batista-Nascimento, L., Toledano, M. B., Thiele, D. J., & Rodrigues-Pousada, C. (2013). Yeast protective response to arsenate involves the repression of the high affinity iron uptake system. Biochimica Et Biophysica Acta-Molecular Cell Research, 1833(5), 997-1005. doi:10.1016/j.bbamcr.2012.12.018
  27. Bernardes, N., Ribeiro, A. S., Abreu, S., Mota, B., Matos, R. G., Arraiano, C. M., Seruca, R., Paredes, J., Fialho, A. M. (2013). The Bacterial Protein Azurin Impairs Invasion and FAK/Src Signaling in P-Cadherin-Overexpressing Breast Cancer Cell Models. Plos One, 8(7), 8. doi:10.1371/journal.pone.0069023
  28. Bleoanca, I., Silva, A. R. C., Pimentel, C., Rodrigues-Pousada, C., & Menezes, R. D. (2013). Relationship between ethanol and oxidative stress in laboratory and brewing yeast strains. Journal of Bioscience and Bioengineering, 116(6), 697-705.  doi:10.1016/j.jbiosc.2013.05.037
  29. Borges, A. F., Ferreira, R. B., & Monteiro, S. (2013). Transcriptomic changes following the compatible interaction Vitis vinifera-Erysiphe necator. Paving the way towards an enantioselective role in plant defence modulation. Plant Physiology and Biochemistry, 68, 71-80. doi:10.1016/j.plaphy.2013.03.024
  30. Braga, T. M., Pomba, C., & Lopes, M. F. S. (2013). High-level vancomycin resistant Enterococcus faecium related to humans and pigs found in dust from pig breeding facilities. Veterinary Microbiology, 161(3-4), 344-349. doi:10.1016/j.vetmic.2012.07.034
  31. Brito, P. H., Rocha, E. P. C., Xavier, K. B., & Gordo, I. (2013). Natural Genome Diversity of AI-2 Quorum Sensing in Escherichia coli: Conserved Signal Production but Labile Signal Reception. Genome Biology and Evolution, 5(1), 16-30. doi:10.1093/gbe/evs122
  32. Cabrita, P., Batista, S., Machado, H., Moes, S., Jeno, P., Manadas, B., Trigo, M.J., Monteiro, S., Ferreira, R.B., Brito, L. (2013). Comparative Analysis of the Exoproteomes of Listeria monocytogenes Strains Grown at Low Temperatures. Foodborne Pathogens and Disease, 10(5), 428-434. doi:10.1089/fpd.2012.1385
  33. Campos, A., Puerto, M., Prieto, A., Camean, A., Almeida, A. M., Coelho, A. V., & Vasconcelos, V. (2013). Protein extraction and two-dimensional gel electrophoresis of proteins in the marine mussel Mytilus galloprovincialis: an important tool for protein expression studies, food quality and safety assessment. Journal of the Science of Food and Agriculture, 93(7), 1779-1787.  doi:10.1002/jsfa.5977
  34. Campos, E., Branquinho, J., Carreira, A. S., Carvalho, A., Coimbra, P., Ferreira, P., & Gil, M. H. (2013). Designing polymeric microparticles for biomedical and industrial applications. European Polymer Journal, 49(8), 2005-2021. doi:10.1016/j.eurpolymj.2013.04.033
  35. Campos, E., Coimbra, P., & Gil, M. H. (2013). An improved method for preparing glutaraldehyde cross-linked chitosan-poly(vinyl alcohol) microparticles. Polymer Bulletin, 70(2), 549-561. doi:10.1007/s00289-012-0853-4
  36. Campos, E., McVey, C. E., Carney, R. P., Stellacci, F., Astier, Y., & Yates, J. (2013). Sensing Single Mixed-Monolayer Protected Gold Nanoparticles by the alpha-Hemolysin Nanopore. Analytical Chemistry, 85(21), 10149-10158. doi:10.1021/ac4014836
  37. Carinhas, N., Duarte, T. M., Barreiro, L. C., Carrondo, M. J. T., Alves, P. M., & Teixeira, A. P. (2013). Metabolic Signatures of GS-CHO Cell Clones Associated With Butyrate Treatment and Culture Phase Transition. Biotechnology and Bioengineering, 110(12), 3244-3257. doi: 10.1002/bit.24983
  38. Carney, R. P., Astier, Y., Carney, T. M., Voitchovsky, K., Silva, P. H. J., & Stellacci, F. (2013). Electrical Method to Quantify Nanoparticle Interaction with Lipid Bilayers. Acs Nano, 7(2), 932-942. doi:10.1021/nn3036304
  39. Carvalheda, C. A., Campos, S. R. R., Machuqueiro, M., & Baptista, A. M. (2013). Structural Effects of pH and Deacylation on Surfactant Protein C in an Organic Solvent Mixture: A Constant-pH MD Study. Journal of Chemical Information and Modeling, 53(11), 2979-2989. doi: 10.1021/ci400479c
  40. Carvalho, A. L., Turner, D. L., Fonseca, L. L., Solopova, A., Catarino, T., Kuipers, O. P., Voit, E.O., Neves, A.R., Santos, H. (2013). Metabolic and Transcriptional Analysis of Acid Stress in Lactococcus lactis, with a Focus on the Kinetics of Lactic Acid Pools. Plos One, 8(7). doi:10.1371/journal.pone.0068470
  41. Carvalho, M. B., Martins, I., Medeiros, J., Tavares, S., Planchon, S., Renaut, J., Nunez, O., Gallart-Ayala, H., Galceran, M.T., Hursthouse, A., Pereira, C. S. (2013). The response of Mucor plumbeus to pentachlorophenol: A toxicoproteomics study. Journal of Proteomics, 78, 159-171. doi:10.1016/j.jprot.2012.11.006
  42. Carvalho, S. B., Botelho, H. M., Leal, S. S., Cardoso, I., Fritz, G., & Gomes, C. M. (2013). Intrinsically Disordered and Aggregation Prone Regions Underlie beta-Aggregation in S100 Proteins. Plos One, 8(10), 11. doi:10.1371/journal.pone.0076629
  43. Carvalho, S. M., Andisi, V. F., Gradstedt, H., Neef, J., Kuipers, O. P., Neves, A. R., & Bijlsma, J. J. E. (2013). Pyruvate Oxidase Influences the Sugar Utilization Pattern and Capsule Production in Streptococcus pneumoniae. Plos One, 8(7). doi:10.1371/journal.pone.0068277
  44. Carvalho, S. M., Kuipers, O. P., & Neves, A. R. (2013). Environmental and Nutritional Factors That Affect Growth and Metabolism of the Pneumococcal Serotype 2 Strain D39 and Its Nonencapsulated Derivative Strain R6. Plos One, 8(3), 15.  doi:10.1371/journal.pone.0058492
  45. Cerca, N., Gomes, F., Bento, J. C., Franca, A., Rolo, J., Miragaia, M., Teixeira, P., Oliveira, R. (2013). Farnesol induces cell detachment from established S. epidermidis biofilms. Journal of Antibiotics, 66(5), 255-258. doi:10.1038/ja.2013.11
  46. Chen, P. W., Fonseca, L. L., Hannun, Y. A., & Voit, E. O. (2013). Coordination of Rapid Sphingolipid Responses to Heat Stress in Yeast. Plos Computational Biology, 9(5). doi:10.1371/journal.pcbi.1003078
  47. Codola, Z., Cardoso, J. M. S., Royo, B., Costas, M., & Lloret-Fillol, J. (2013). Highly Effective Water Oxidation Catalysis with Iridium Complexes through the Use of NaIO4. Chemistry-a European Journal, 19(22), 7203-7213. doi: 10.1002/chem.201204568
  48. Coecke, S., Pelkonen, O., Leite, S. B., Bernauer, U., Bessems, J. G. M., Bois, F. Y., Gundert-Remy, U., Loizou, G., Testai, E., Zaldivar, J. M. (2013). Toxicokinetics as a key to the integrated toxicity risk assessment based primarily on non-animal approaches. Toxicology in Vitro, 27(5), 1570-1577. doi:10.1016/j.tiv.2012.06.012
  49. Coelho, D. S., Cairrao, F., Zeng, X. M., Pires, E., Coelho, A. V., Ron, D., Ryoo, H.D., Domingos, P. M. (2013). Xbp1-Independent Ire1 Signaling Is Required for Photoreceptor Differentiation and Rhabdomere Morphogenesis in Drosophila. Cell Reports, 5(3), 791-801. doi: 10.1016/j.celrep.2013.09.046
  50. Conceicao, T., Diamantino, F., Coelho, C., de Lencastre, H., & Aires-de-Sousa, M. (2013). Contamination of Public Buses with MRSA in Lisbon, Portugal: A Possible Transmission Route of Major MRSA Clones within the Community. Plos One, 8(11), 6. : doi:10.1371/journal.pone.0077812
  51. Correia, B., Cerqueira, S. A., Beauchemin, C., de Miranda, M. P., Li, S. J., Ponnusamy, R., Rodrigues, L., Schneider, T.R., Carrondo, M.A., Kaye, K.M., Simas, J.P.,  McVey, C. E. (2013). Crystal Structure of the Gamma-2 Herpesvirus LANA DNA Binding Domain Identifies Charged Surface Residues Which Impact Viral Latency. Plos Pathogens, 9(10), 16. doi: 10.1371/journal.ppat.1003673
  52. Correia, V. G., Coelho, M., Barroso, T., Raje, V. P., Bonifacio, V. D. B., Casimiro, T., Pinho, M.G., Aguiar-Ricardo, A. (2013). Anti-biofouling 3D porous systems: the blend effect of oxazoline-based oligomers on chitosan scaffolds. Biofouling, 29(3), 273-282. doi:10.1080/08927014.2013.766172
  53. Costa, A. J. L., Soromenho, M. R. C., Shimizu, K., Esperanca, J., Lopes, J. N. C., & Rebelo, L. P. N. (2013). Unusual LCST-type behaviour found in binary mixtures of choline-based ionic liquids with ethers. Rsc Advances, 3(26), 10262-10271. doi:10.1039/c3ra40327k
  54. Costa, J. M., Grant, O. M., & Chaves, M. M. (2013). Thermography to explore plant-environment interactions. Journal of Experimental Botany, 64(13), 3937-3949. doi:10.1093/jxb/ert029
  55. Couto, N., Belas, A., Tilley, P., Couto, I., Gama, L. T., Kadlec, K., Schwarz, S., Pomba, C. (2013). Biocide and antimicrobial susceptibility of methicillin-resistant staphylococcal isolates from horses. Veterinary Microbiology, 166(1-2), 299-303. doi:10.1016/j.vetmic.2013.05.011
  56. Cristovao, J. S., Leal, S. S., Cardoso, I., & Gomes, C. M. (2013). Small Molecules Present in the Cerebrospinal Fluid Metabolome Influence Superoxide Dismutase 1 Aggregation. International Journal of Molecular Sciences, 14(9), 19128-19145.                       doi:10.3390/ijms140919128
  57. Cruz, M. M., Borges, R. P., Godinho, M., Marques, C. S., Langa, E., Ribeiro, A. P. C., Lourenco, M.J.V., Santos, F.J.V., de Castro, C.A.N., Macatrao, M., Tariq M., Esperanca, J.M.S.S., Lopes, J.N.C., Afonso, C.A.M., Rebelo, L. P. N. (2013). Thermophysical and magnetic studies of two paramagnetic liquid salts: C(4)mim FeCl4 and P-66614 FeCl4. Fluid Phase Equilibria, 350, 43-50. doi:10.1016/j.fluid.2013.03.001
  58. Cunha, B. M. P., Trindade, I. N., Couto, N. A. S., Costa, P. J., Rodrigues, P., Barros, M. T., Costa, M.L., Duarte, M.F., Fernandez, M.T., Madeira, P. J. A. (2013). Gas-phase interaction between nickel (II) and nitrobenzyl azides: An ESI-MSn study. International Journal of Mass Spectrometry, 351, 27-36. doi: 10.1016/j.ijms.2013.05.012
  59. Cunha, S., d'Avo, A. F., Mingote, A., Lamosa, P., da Costa, M. S., & Costa, J. (2013). Mannosylglucosylglycerate biosynthesis in the deep-branching phylum Planctomycetes: characterization of the uncommon enzymes from Rhodopirellula baltica. Scientific Reports, 3. doi: 10.1038/srep02378
  60. d'Avo, A. F., Cunha, S., Mingote, A., Lamosa, P., da Costa, M. S., & Costa, J. (2013). A Unique Pool of Compatible Solutes on Rhodopirellula baltica, Member of the Deep-Branching Phylum Planctomycetes. Plos One, 8(6).  doi:10.1371/journal.pone.0068289
  61. da Silva, S. M., Voordouw, J., Leitao, C., Martins, M., Voordouw, G., & Pereira, I. A. C. (2013). Function of formate dehydrogenases in Desulfovibrio vulgaris Hildenborough energy metabolism. Microbiology-Sgm, 159, 1760-1769. doi: 10.1099/mic.0.067868-0
  62. Damas, J. M., Filipe, L. C. S., Campos, S. R. R., Lousa, D., Victor, B. L., Baptista, A. M., & Soares, C. M. (2013). Predicting the Thermodynamics and Kinetics of Helix Formation in a Cyclic Peptide Model. Journal of Chemical Theory and Computation, 9(11), 5148-5157. doi: 10.1021/ct400529k
  63. Dantas, J. M., Morgado, L., Pokkuluri, P. R., Turner, D. L., & Salgueiro, C. A. (2013). Solution structure of a mutant of the triheme cytochrome PpcA from Geobacter sulfurreducens sheds light on the role of the conserved aromatic residue F15. Biochimica Et Biophysica Acta-Bioenergetics, 1827(4), 484-492. doi: 10.1016/j.bbabio.2012.12.008
  64. David, T. S., Pinto, C. A., Nadezhdina, N., Kurz-Besson, C., Henriques, M. O., Quilho, T., Cermak, J., Chaves, M.M., Pereira, J.S.,  David, J. S. (2013). Root functioning, tree water use and hydraulic redistribution in Quercus suber trees: A modeling approach based on root sap flow. Forest Ecology and Management, 307, 136-146. doi: 10.1016/j.foreco.2013.07.012
  65. De Angeli, A., Baetz, U., Francisco, R., Zhang, J. B., Chaves, M. M., & Regalado, A. (2013). The vacuolar channel VvALMT9 mediates malate and tartrate accumulation in berries of Vitis vinifera. Planta, 238(2), 283-291. doi: 10.1007/s00425-013-1888-y
  66. de los Mozos, I. R., Vergara-Irigaray, M., Segura, V., Villanueva, M., Bitarte, N., Saramago, M., Domingues, S., Arraiano, C.M., Fechter, P., Romby, P., Valle, J., Solano, C., Lasa, I., Toledo-Arana, A. (2013). Base Pairing Interaction between 5 '- and 3 '-UTRs Controls icaR mRNA Translation in Staphylococcus aureus. Plos Genetics, 9(12), 18. doi:10.1371/journal.pgen.1004001
  67. de Miranda, M. P., Lopes, F. B., McVey, C. E., Bustelo, X. R., & Simas, J. P. (2013). Role of Src Homology Domain Binding in Signaling Complexes Assembled by the Murid gamma-Herpesvirus M2 Protein. Journal of Biological Chemistry, 288(6), 3858-3870. : doi:10.1074/jbc.M112.439810
  68. de Vega-Bartol, J. J., Santos, R. R., Simoes, M., & Miguel, C. M. (2013). Normalizing gene expression by quantitative PCR during somatic embryogenesis in two representative conifer species: Pinus pinaster and Picea abies. Plant Cell Reports, 32(5), 715-729. doi:10.1007/s00299-013-1407-4
  69. de Vega-Bartol, J. J., Simoes, M., Lorenz, W. W., Rodrigues, A. S., Alba, R., Dean, J. F. D., & Miguel, C. M. (2013). Transcriptomic analysis highlights epigenetic and transcriptional regulation during zygotic embryo development of Pinus pinaster. Bmc Plant Biology, 13. doi:10.1186/1471-2229-13-123
  70. Deb, M. L., Dey, S. S., Bento, I., Barros, M. T., & Maycock, C. D. (2013). Copper-Catalyzed Regioselective Intramolecular Oxidative alpha-Functionalization of Tertiary Amines: An Efficient Synthesis of Dihydro-1,3-Oxazines. Angewandte Chemie-International Edition, 52(37), 9791-9795. doi: 10.1002/anie.201304654
  71. Domingues, S., Aires, A. C., Mohedano, M. L., Lopez, P., & Arraiano, C. M. (2013). A new tool for cloning and gene expression in Streptococcus pneumoniae. Plasmid, 70(2), 247-253. doi:10.1016/j.plasmid.2013.05.005
  72. dos Santos, R., Rocha, A., Matias, A., Duarte, C., Sa-Nogueira, I., Lourenco, N., Borges, J.P., Vidinha, P. (2013). Development of antimicrobial Ion Jelly fibers. Rsc Advances, 3(46), 24400-24405. doi:10.1039/c3ra44258f
  73. Escrevente, C., Grammel, N., Kandzia, S., Zeiser, J., Tranfield, E. M., Conradt, H. S., & Costa, J. (2013). Sialoglycoproteins and N-Glycans from Secreted Exosomes of Ovarian Carcinoma Cells. Plos One, 8(10), 11. doi:10.1371/journal.pone.0078631
  74. Espadinha, D., Faria, N. A., Miragaia, M., Lito, L. M., Melo-Cristino, J., de Lencastre, H., & Medicos Sentinela, N. (2013). Extensive Dissemination of Methicillin-Resistant Staphylococcus aureus (MRSA) between the Hospital and the Community in a Country with a High Prevalence of Nosocomial MRSA. Plos One, 8(4), 8. doi:10.1371/journal.pone.0059960
  75. Esteves, C. V., Lamosa, P., Delgado, R., Costa, J., Desogere, P., Rousselin, Y., Goze, C., Denat, F. (2013). Remarkable Inertness of Copper(II) Chelates of Cyclen-Based Macrobicycles with Two trans-N-Acetate Arms. Inorganic Chemistry, 52(9), 5138-5153.  doi:10.1021/ic400015v
  76. Esteves, C. V., Lima, L. M. P., Mateus, P., Delgado, R., Brandao, P., & Felix, V. (2013). Cyclen derivatives with two trans-methylnitrophenolic pendant arms: a structural study of their copper(II) and zinc(II) complexes. Dalton Transactions, 42(17), 6149-6160. doi:10.1039/c2dt32363j
  77. Farha, M. A., Leung, A., Sewell, E. W., D'Elia, M. A., Allison, S. E., Ejim, L., Pereira, P.M., Pinho, M.G., Wright, G.D.,. Brown, E. D. (2013). Inhibition of WTA Synthesis Blocks the Cooperative Action of PBPs and Sensitizes MRSA to beta-Lactams. Acs Chemical Biology, 8(1), 226-233.  doi:10.1021/cb300413m
  78. Faria, C., Jorge, C. D., Borges, N., Tenreiro, S., Outeiro, T. F., & Santos, H. (2013). Inhibition of formation of alpha-synuclein inclusions by mannosylglycerate in a yeast model of Parkinson's disease. Biochimica Et Biophysica Acta-General Subjects, 1830(8), 4065-4072. doi:10.1016/j.bbagen.2013.04.015
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  229. Seixas, J. D., Mukhopadhyay, A., Santos-Silva, T., Otterbein, L. E., Gallo, D. J., Rodrigues, S. S., Guerreiro, B.H., Goncalves, A.M.L., Penacho, N., Marques, A.R., Coelho, A.C., Reis, P.M., Romao, M.J., Romao, C. C. (2013). Characterization of a versatile organometallic pro-drug (CORM) for experimental CO based therapeutics. Dalton Transactions, 42(17), 5985-5998.                   doi:10.1039/c2dt32174b
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  253. Tavares, L., Pimpao, R., McDougall, G., Stewart, D., Ferreira, R. B., & Santos, C. N. (2013). Elucidating Phytochemical Production in Juniperus sp.: Seasonality and Response to Stress Situations. Journal of Agricultural and Food Chemistry, 61(17), 4044-4052.  doi:10.1021/jf304752q
  254. Tavares, S., Vesentini, D., Fernandes, J. C., Ferreira, R. B., Laureano, O., Ricardo-Da-Silva, J. M., & Amancio, S. (2013). Vitis vinifera secondary metabolism as affected by sulfate depletion: Diagnosis through phenylpropanoid pathway genes and metabolites. Plant Physiology and Biochemistry, 66, 118-126. doi:10.1016/j.plaphy.2013.01.022
  255. Tavares, T. G., Spindola, H., Longato, G., Pintado, M. E., Carvalho, J. E., & Malcata, F. X. (2013). Antinociceptive and anti-inflammatory effects of novel dietary protein hydrolysate produced from whey by proteases of Cynara cardunculus. International Dairy Journal, 32(2), 156-162. doi: 0.1016/j.idairyj.2013.05.010
  256. Teixeira, N., Varahan, S., Gorman, M. J., Palmer, K. L., Zaidman-Remy, A., Yokohata, R., Nakayama, J., Hancock, L.E., Jacinto, A., Gilmore, M.S., Lopes, M. D. S. (2013). Drosophila Host Model Reveals New Enterococcus faecalis Quorum-Sensing Associated Virulence Factors. Plos One, 8(5), 12. doi:10.1371/journal.pone.0064740
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2. Fernandes P, Castro R, Alves PM, Carrondo MJT e Coroadinha AS (2013) Terapia génica e desafios no desenvolvimento de vectores virais. Boletin Biotecnologia, 2(4), 21-23, Novembro 2013.

3. Gomes A, Fortalezas S, Pimpão R, Figueira I, Maroco J, Aguiar C, Ferreira RB, Miguel C, Santos CN (2013) Valuing the Endangered Species Antirrhinum lopesianum: Neuroprotective Activities and Strategies for in vitro Plant Propagation. Antioxidants 2(4):273-292. doi:10.3390/antiox2040273

4. Gouveia, C.; Gavino A., Bouchami O.,Miragaia M.,Varandas L.,Lencastre H., and Brito M.J.(2013). Community-Associated Methicillin-Resistant Staphylococcus aureus Lacking PVL, as a Cause of Severe Invasive Infection Treated with Linezolid. Case reports in Pediatrics. doi:10.1155/2013/727824

5. Milheiriço, C. (2013)Identification and characterization of a new methicillin genetic determinant in Staphylococcus aureus. SPM magazine. Ano 2. Número 2.

6. Oliveira M, J.Pereira, S.C.Verde, M.G.Lima, P.Pinto, P.B. de Oliveira, C. Junqueira, H.Marcos, T.Silva, R.Melo, C.N.Santos, M. L. Botelho, (2013) Evaluation of potential of gamma radiation as a conservation treatment for blackberry fruits. J Berry Research, 3,93-102.doi:10.3233/JBR-130050

7. Pereira I.A.C. (2013) An Enzymatic Route to H2 Storage.Science, 342, 1329-1330. doi:10.1126/science.1247698

8. Ponnusamy R, Lohkamp B. (2013). Insights into the oligomerization of CRMPs: crystal structure of human collapsin response mediator protein 5. J Neurochem. 2013 Jun; 125(6):855-68. doi: 10.1111/jnc.12188

9. Quiblier C., A. Luczak-Kadlubowska, E. Holdener, D. Alborn, T. Schneider, I. Wiedemann, M.G. Pinho, H-G. Sahl, S. Rohrer, B. Berger-Bächi, Maria M. Senn (2013) The Staphylococcus aureus membrane protein SA2056 interacts with peptidoglycan synthesis enzymes. Antibiotics 2: 11-27.doi:10.3390/antibiotics2010011

10. Rosa LF, Neto SN, Alves AS, Louro RO, (2013). Electrocatálise Microbiana: Uma plataforma versátil para processos industriais sustentáveis, Boletim Biotecnologia, 3.

11. Sá-Moura B., AM Simões, J Fraga, H Fernandes, IA Abreu, HM Botelho, CM Gomes, AJ Marques, RJ Dohmen, PC Ramos, S Macedo-Ribeiro (2013) Biochemical and Biophysical Characterization of Recombinant Yeast Proteasome Maturation Factor Ump1. Comput Struct Biotechnol J. 7: e201304006. doi:10.5936/csbj.201304006

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13. Sebastiana, M., Figueiredo A., Monteiro F.,Martins J., Franco C., Coelho A.V.,Vaz F.,Simões T.,Penque D.,Pais M.;Ferreira S. (2013). A possible approach for gel-based proteomic studies in recalcitrant woody plants, SpringerPlus 2(1) . doi:10.1186/2193-1801-2-210

14. Simão D, Pinto C, Serra M, Brito C, Alves PM. (2013). Sistemas de cultura 3D para diferenciação neural de células estaminais humanas. Boletim Biotecnologia, 2(4), 17-20, Novembro 2013.



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2. Louro, Ricardo O. and Crichton,  Robert R. (Eds.) (2013) Practical Approaches to Biological Inorganic Chemistry. Elsevier B.V. Amsterdam, The Netherlands. ISBN:987-0-444-56351-4


Book Chapters

1. Carvalho SB, Cardoso I, Botelho HM, Yanamandra K, Fritz G., Gomes C M and Morozova-Roche (2013) "Structural heterogeneity and bioimaging of S100 amyloid assemblies". In Bio-nanoimaging: protein misfolding and aggregation (V. N. Uversky and Y. N. Lyubchenko eds.), pp. 197-212. Academic Press

2. Duque A.S., Almeida A.M., Silva A.B., Silva J.M., Farinha A.P., Santos D., Fevereiro P., Araújo S.S. (2013)" Abiotic stress responses in plants: unraveling the complexity of genes and networks to survive." In Abiotic Stress - Plant Responses and Applications in Agriculture, (K. Vahdati and C. Leslie, eds.) pp. 49-101 . InTech. doi:10.5772/52779

3. Kandzia, S., Costa, J. (2013) "N-Glycosylation Analysis by HPAEC-PAD and Mass Spectrometry" In Ovarian Cancer: Methods and Protocols, Methods in Molecular Biology, (Anastasia Malek and Oleg Tchernitsa eds.), pp. 301-312, vol. 1049, Springer Science+Business Media, New York.

4. Laires R., Koci K., Pires E., Franco C., Lamosa P., Coelho A.V. (2013). Tandem MS and NMR: An Efficient Couple for the Characterization of Saponins. In Applications of Tandem Mass Spectrometry- its Principles and Applications, (Coelho A.V. and Franco C. Eds.) pp.117-135, InTech. Available from:

5. Louro RO. (2013) "Introduction to Biomolecular NMR and Metals" In Practical Approaches to Biological Inorganic Chemistry, (Ricardo O.Louro and Robert R. Crichton eds.) pp.77-107, Elsevier B. V. Amsterdam, The Netherlands. doi:10.1016/B978-0-444-56351-4.00004-X

6. Louro RO. and Robert R. Crichton (2013) "Other Spectroscopic Methods for Probing Metal Centres in Biological Systems" In Practical Approaches to Biological Inorganic Chemistry, (Ricardo O. Louro and Robert R. Crichton Eds) pp.161-167, Elsevier B. V. Amsterdam, The Netherlands. doi: 10.1016/B978-0-444-56351-4.00007-5

7. Pikula S., J. Bandorowicz-Pikula and P. Groves (2013) “NMR of lipids”. In Nuclear Magnetic Resonance, (Krystyna Kamienska-Trela, Jacek Wojcik Eds.)pp. 362-382, Royal Society of Chemistry press, UK. doi:10.1039/9781849737678

8. Romão, C. C. and Vieira H.L.A. (2013) "Metal Carbonyls for CO-based Therapies: challenges and successes". In Advances in Organometallic Chemistry and Catalysis: ICOMC Silver/Gold Jubilee Book.(A. J. L. Pombeiro Ed.) pp.545-561, J. Wiley. doi:10.1002/9781118742952.ch41

9. Royo, B (2013) "Cyclopentadienyl-functionalized N-Heterocyclic Carbene Complexes of Iron and Nickel: Catalysts for Reductions". In Advances in Organometallic Chemistry and Catalysis: ICOMC Silver/Gold Jubilee Book (A. J. L. Pombeiro Ed.) pp.133-145, J. Wiley

10. Serra M, Correia C, Brito C and Alves PM (2013) “Bioprocessing of Human Pluripotent Stem Cells for Cell Therapy Applications” - Chapter 4 (M. Al-Rubeai, M. Naciri (eds.), In Stem Cells and Cell Therapy, Cell Engineering 8, Springer Science, doi:10.1007/978-94-007-7196-3_4

11. Simplicio A.L.; Coroadinha A.S.; Gilmer J.F.; Lamego J.(2013) "A methodology for detection and quantification of esterase activity". In Methods in Molecular Biology,(Volpi N.,Maccari F. eds.) pp. 309-319, Springer Protocols. doi: 10.1007/978-1-62703-296-4_22

12. Tomás H, Rodrigues AF, Alves PM and Coroadinha AS. 2013. ‘Lentiviral gene therapy vectors: challenges and future directions’ In Gene Therapy - Tools and Potential Applications (Dr. Francisco Martin Ed.), ISBN: 978-953-51-1014-9, InTech.doi:10.5772/52534

13. Vaz Patto MC, Mendes-Moreira PM, Alves ML, Mecha E, Brites C, Bronze R, Pego S (2013) "Participatory plant quality breeding: An ancient art revisited by knowledge sharing.The Portuguese experience. In Plant Breeding From laboratories to Fields,(Andersen SB ed.), pp. 255-288. InTech. doi:10.5772/52951




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