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2020

ITQB articles published in 2020

       Articles indexed in Scopus:

      Updated on 29th September 2021:

  1. Abecasis, B., Canhão, P.G.M., Almeida, H.V., Calmeiro, T., Fortunato, E., Gomes-Alves, P., Serra, M. & Alves, P.M. (2020). Toward a microencapsulated 3D hiPSC-derived in vitro cardiac microtissue for recapitulation of human heart microenvironment features. Frontiers in Bioengineering and Biotechnology, 8 doi:10.3389/fbioe.2020.580744
  2. Abreu, B., Lopes, E. F., Oliveira, A. S. F., & Soares, C. M. (2020). F508del disturbs the dynamics of the nucleotide binding domains of CFTR before and after ATP hydrolysis. Proteins: Structure, Function and Bioinformatics, 88(1), 113-126. doi:10.1002/prot.25776
  3. Abreu, S., Silva, F., Mendes, R., Mendes, T.F., Teixeira, M., Santo, V.E., Boghaert, E.R., Félix, A. & Brito, C. (2020). Patient-derived ovarian cancer explants: Preserved viability and histopathological features in long-term agitation-based cultures. Scientific Reports, 10(1) doi:10.1038/s41598-020-76291-z
  4. Agostinho, M., Moniz Alves, C., Aresta, S., Borrego, F., Borlido-Santos, J., Cortez, J., Lima Costa, T., António Lopes, J., Moreira, S., Santos, J., Trindade, M., Varela, C. & Vidal, S. (2020). The interface of science: The case for a broader definition of research management. Perspectives: Policy and Practice in Higher Education, 24(1), 19-27. doi:10.1080/13603108.2018.1543215
  5. Aires-De-sousa, M., Fournier, C., Lopes, E., de Lencastre, H., Nordmann, P., & Poirel, L. (2020). High colonization rate and heterogeneity of ESBL-and carbapenemase-producing enterobacteriaceae isolated from gull feces in lisbon, portugal. Microorganisms, 8(10), 1-12. doi:10.3390/microorganisms8101487
  6. Aires-de-Sousa, M., Lopes, E., Gonçalves, M. L., Pereira, A. L., Machado e Costa, A., de Lencastre, H., & Poirel, L. (2020). Intestinal carriage of extended-spectrum beta-lactamase–producing enterobacteriaceae at admission in a portuguese hospital. European Journal of Clinical Microbiology and Infectious Diseases, 39(4), 783-790. doi:10.1007/s10096-019-03798-3
  7. Aires-De-Sousa, M., Ortiz De La Rosa, J. M., Goncalves, M. L., Costa, A., Nordmann, P., & Poirel, L. (2020). Occurrence of NDM-1-producing morganella morganii and proteus mirabilis in a single patient in portugal: Probable in vivo transfer by conjugation. Journal of Antimicrobial Chemotherapy, 75(4), 903-906. doi:10.1093/jac/dkz542
  8. Albors-Vaquer, A., Rizvi, A., Matzapetakis, M., Lamosa, P., Coelho, A.V., Patel, A.B., Mande, S.C., Gaddam, S., Pineda-Lucena, A., Banerjee, S. & Puchades-Carrasco, L. (2020). Active and prospective latent tuberculosis are associated with different metabolomic profiles: Clinical potential for the identification of rapid and non-invasive biomarkers. Emerging Microbes and Infections, 9(1), 1131-1139. doi:10.1080/22221751.2020.1760734
  9. Alexandre, A. M. R. C., Matias, A. A., Bronze, M. R., Cocero, M. J., & Mato, R. (2020). Phenolic compounds extraction of arbutus unedo L.: Process intensification by microwave pretreatment. Processes, 8(3) doi:10.3390/pr8030298
  10. Alexandre, A. M. R. C., Serra, A. T., Matias, A. A., Duarte, C. M. M., & Bronze, M. R. (2020). Supercritical fluid extraction of arbutus unedo distillate residues - impact of process conditions on antiproliferative response of extracts. Journal of CO2 Utilization, 37, 29-38. doi:10.1016/j.jcou.2019.11.002
  11. Almeida, H. F. D., Neves, M. C., Trindade, T., Marrucho, I. M., & Freire, M. G. (2020). Supported ionic liquids as efficient materials to remove non-steroidal anti-inflammatory drugs from aqueous media. Chemical Engineering Journal, 381 doi:10.1016/j.cej.2019.122616
  12. Almeida, S. T., Pedro, T., Paulo, A. C., de Lencastre, H., & Sá-Leão, R. (2020). Re-evaluation of streptococcus pneumoniae carriage in portuguese elderly by qPCR increases carriage estimates and unveils an expanded pool of serotypes. Scientific Reports, 10(1) doi:10.1038/s41598-020-65399-x
  13. Alves, M.L., Bento-Silva, A., Carbas, B., Gaspar, D., Paulo, M., Brites, C., Mendes-Moreira, P., Brites, C.M., Bronze, M.D.R., Malosetti, M., Van Eeuwijk, F. & Vaz Patto, M.C. (2020). Alleles to enhance antioxidant content in maize-A genome-wide association approach. Journal of Agricultural and Food Chemistry, 68(13), 4051-4061. doi:10.1021/acs.jafc.9b07190
  14. Alves, M.L., Bento-Silva, A., Gaspar, D., Paulo, M., Brites, C., Mendes-Moreira, P., Bronze, M.D.R., Malosetti, M., Van Eeuwijk, F. & Vaz Patto, M.C.  (2020). Volatilome-genome-wide association study on wholemeal maize flour. Journal of Agricultural and Food Chemistry, 68(29), 7809-7818. doi:10.1021/acs.jafc.0c01273
  15. Anacleto, P., Barbosa, V., Alves, R. N., Maulvault, A. L., Bronze, M. R., & Marques, A. (2020). Green tea infusion reduces mercury bioaccessibility and dietary exposure from raw and cooked fish. Food and Chemical Toxicology, 145 doi:10.1016/j.fct.2020.111717
  16. Ankenbauer, A., Schäfer, R. A., Viegas, S. C., Pobre, V., Voß, B., Arraiano, C. M., & Takors, R. (2020). Pseudomonas putida KT2440 is naturally endowed to withstand industrial-scale stress conditions. Microbial Biotechnology, 13(4), 1145-1161. doi:10.1111/1751-7915.13571
  17. Apura, P., Saramago, M., Peregrina, A., Viegas, S.C., Carvalho, S.M., Saraiva, L.M., Arraiano, C.M. & Domingues, S. (2020). Tailor-made sRNAs: A plasmid tool to control the expression of target mRNAs in pseudomonas putida. Plasmid, 109 doi:10.1016/j.plasmid.2020.102503
  18. Arguedas, A., Trzciński, K., O’Brien, K.L., Ferreira, D.M., Wyllie, A.L., Weinberger, D., Danon, L., Pelton, S.I., Azzari, C., Hammitt, L.L., Sá-Leão, R., Brandileone, M.-.C., Saha, S., Suaya, J., Isturiz, R., Jodar, L. & Gessner, B.D. (2020). Upper respiratory tract colonization with streptococcus pneumoniae in adults. Expert Review of Vaccines, 19(4), 353-366. doi:10.1080/14760584.2020.1750378
  19. Arias-Baldrich, C., Silva, M.C., Bergeretti, F., Chaves, I., Miguel, C., Saibo, N.J.M., Sobral, D., Faria, D. & Barros, P.M. (2020). CorkOakDB-the cork oak genome database portal. Database, 2020 doi:10.1093/database/baaa114
  20. Ayouaz, S., Oliveira-Alves, S.C., Lefsih, K., Serra, A.T., Bento Da Silva, A., Samah, M., Karczewski, J., Madani, K. & Bronze, M.R. (2020). Phenolic compounds from nerium oleander leaves: Microwave assisted extraction, characterization, antiproliferative and cytotoxic activities. Food and Function, 11(7), 6319-6331. doi:10.1039/d0fo01180k
  21. Barbosa, C., Silveira, C.M., Silva, D., Brissos, V., Hildebrandt, P., Martins, L.O. & Todorovic, S. (2020). Immobilized dye-decolorizing peroxidase (DyP) and directed evolution variants for hydrogen peroxide biosensing. Biosensors and Bioelectronics, 153 doi:10.1016/j.bios.2020.112055
  22. Barbosa, T. M., Baltazar, C. S. A., Cruz, D. R., Lousa, D., & Soares, C. M. (2020). Studying O2 pathways in [NiFe]- and [NiFeSe]-hydrogenases. Scientific Reports, 10(1) doi:10.1038/s41598-020-67494-5
  23. Barreto, H. C., Cordeiro, T. N., Henriques, A. O., & Gordo, I. (2020). Rampant loss of social traits during domestication of a bacillus subtilis natural isolate. Scientific Reports, 10(1) doi:10.1038/s41598-020-76017-1
  24. 17.         Barroso-Batista, J., Pedro, M.F., Sales-Dias, J., Pinto, C.J.G., Thompson, J.A., Pereira, H., Demengeot, J., Gordo, I. & Xavier, K.B. (2020). Specific eco-evolutionary contexts in the mouse gut reveal escherichia coli metabolic versatility. Current Biology, 30(6), 1049-1062.e7. doi:10.1016/j.cub.2020.01.050
  25. Batista, M. P., Gonçalves, V. S. S., Gaspar, F. B., Nogueira, I. D., Matias, A. A., & Gurikov, P. (2020). Novel alginate-chitosan aerogel fibres for potential wound healing applications. International Journal of Biological Macromolecules, 156, 773-782. doi:10.1016/j.ijbiomac.2020.04.089
  26. Belcher Dufrisne, M., Jorge, C.D., Timóteo, C.G., Petrou, V.I., Ashraf, K.U., Banerjee, S., Clarke, O.B., Santos, H. & Mancia, F. (2020). Structural and functional characterization of phosphatidylinositol-phosphate biosynthesis in mycobacteria. Journal of Molecular Biology, 432(18), 5137-5151. doi:10.1016/j.jmb.2020.04.028
  27. Bento‐Silva, A., Duarte, N., Mecha, E., Belo, M., Vaz Patto, M. C., & do Rosário Bronze, M. (2020). Hydroxycinnamic acids and their derivatives in broa, a traditional ethnic maize bread. Foods, 9(10) doi:10.3390/foods9101471
  28. Bento-Silva, A., Koistinen, V.M., Mena, P., Bronze, M.R., Hanhineva, K., Sahlstrøm, S., Kitrytė, V., Moco, S. & Aura, A.-. (2020). Factors affecting intake, metabolism and health benefits of phenolic acids: Do we understand individual variability? European Journal of Nutrition, 59(4), 1275-1293. doi:10.1007/s00394-019-01987-6
  29. Bonifácio, V. D. B., Pereira, S. A., Serpa, J., & Vicente, J. B. (2020). Cysteine metabolic circuitries: Druggable targets in cancer. British Journal of Cancer, doi:10.1038/s41416-020-01156-1
  30. Borges, P.T., Brissos, V., Hernandez, G., Masgrau, L., Lucas, M.F., Monza, E., Frazão, C., Cordeiro, T.N. & Martins, L.O. (2020). Methionine-rich loop of multicopper oxidase McoA follows open-to-close transitions with a role in enzyme catalysis. ACS Catalysis, 10(13), 7162-7176. doi:10.1021/acscatal.0c01623
  31. Bouchami, O., Fraqueza, M. J., Faria, N. A., Alves, V., Lawal, O. U., de Lencastre, H., & Miragaia, M. (2020). Evidence for the dissemination to humans of methicillin-resistant staphylococcus aureus ST398 through the pork production chain: A study in a portuguese slaughterhouse. Microorganisms, 8(12), 1-16. doi:10.3390/microorganisms8121892
  32. Calhau, I.B., Gomes, A.C., Bruno, S.M., Coelho, A.C., Magalhães, C.I.R., Romão, C.C., Valente, A.A., Gonçalves, I.S. & Pillinger, M. (2020). One-pot intercalation strategy for the encapsulation of a CO-releasing organometallic molecule in a layered double hydroxide. European Journal of Inorganic Chemistry, 2020(28), 2726-2736. doi:10.1002/ejic.202000202
  33. Camacho, M. J., de Andrade, E., Mota, M., Nobrega, F., Vicente, C., Rusinque, L., & Inácio, M. L. (2020). Potato cyst nematodes: Geographical distribution, phylogenetic relationships and integrated pest management outcomes in portugal. Frontiers in Plant Science, 11 doi:10.3389/fpls.2020.606178
  34. Campos, C., Fragoso, S., Luís, R., Pinto, F., Brito, C., Esteves, S., Pataco, M., Santos, S., Machado, P., Vicente, J.B., Rosa, J.C., Cavaco, B.M., Moura, C. & Pojo, M. (2020). High-throughput sequencing identifies 3 novel susceptibility genes for hereditary melanoma. Genes, 11(4) doi:10.3390/genes11040403
  35. Canas, S., Trindade, C. S., Sun, B., & Naves, P. (2020). Phenolic compounds involved in pine wilt disease: HPLC-based method development and validation for their quantification. Journal of Plant Biochemistry and Biotechnology, doi:10.1007/s13562-020-00599-0
  36. Carbas, B., Machado, N., Oppolzer, D., Ferreira, L., Queiroz, M., Brites, C., Rosa, E.A.S. & Barros, A.I.R.N.A.  (2020). Nutrients, antinutrients, phenolic composition, and antioxidant activity of common bean cultivars and their potential for food applications. Antioxidants, 9(2) doi:10.3390/antiox9020186
  37. Carbas, B., Machado, N., Oppolzer, D., Queiroz, M., Brites, C., Rosa, E. A. S., & Barros, A. I. R. N. A. (2020). Prediction of phytochemical composition, in vitro antioxidant activity and individual phenolic compounds of common beans using MIR and NIR spectroscopy. Food and Bioprocess Technology, 13(6), 962-977. doi:10.1007/s11947-020-02457-2
  38. Carpenter, J. M., Zhong, F., Ragusa, M. J., Louro, R. O., Hogan, D. A., & Pletneva, E. V. (2020). Structure and redox properties of the diheme electron carrier cytochrome c4 from pseudomonas aeruginosa. Journal of Inorganic Biochemistry, 203 doi:10.1016/j.jinorgbio.2019.110889
  39. Carrola, J., Duarte, N., Florindo, P., Henriques, S., da Silva, G., Bijlsma, L., Moreira, R., Correia, C., Perry, M.D.J., Lopes, Á., de Mello-Sampayo, C. & Bronze, M.D.R.  (2020). Metabolism of N-ethylhexedrone and buphedrone: An in vivo study in mice using HPLC-MS/MS. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 1159 doi:10.1016/j.jchromb.2020.122340
  40. Cartaxo, A. L., Almeida, J., Gualda, E. J., Marsal, M., Loza-Alvarez, P., Brito, C., & Isidro, I. A. (2020). A computational diffusion model to study antibody transport within reconstructed tumor microenvironments. BMC Bioinformatics, 21(1) doi:10.1186/s12859-020-03854-2
  41. Cartaxo, A.L., Estrada, M.F., Domenici, G., Roque, R., Silva, F., Gualda, E.J., Loza-Alvarez, P., Sflomos, G., Brisken, C., Alves, P.M., André, S. & Brito, C. (2020). A novel culture method that sustains ERα signaling in human breast cancer tissue microstructures. Journal of Experimental and Clinical Cancer Research, 39(1) doi:10.1186/s13046-020-01653-4
  42. Carvalho, L.A.R., Almeida, V.T., Brito, J.A., Lum, K.M., Oliveira, T.F., Guedes, R.C., Gonçalves, L.M., Lucas, S.D., Cravatt, B.F., Archer, M. & Moreira, R. (2020). 3-oxo-β-sultam as a sulfonylating chemotype for inhibition of serine hydrolases and activity-based protein profiling. ACS Chemical Biology, 15(4), 878-883. doi:10.1021/acschembio.0c00090
  43. Cheleuitte-Nieves, C.E., Diaz, L.L., Pardos de la Gandara, M., Gonzalez, A., Freiwald, W.A., de Lencastre, H.M., Tomasz, A. & Euler, C.W. (2020). Evaluation of topical lysostaphin as a novel treatment for instrumented rhesus macaques (macaca mulatta) infected with methicillin-resistant staphylococcus aureus. Comparative Medicine, 70(5), 335-347. doi:10.30802/AALAS-CM-19-000102
  44. Chernyh, N.A., Neukirchen, S., Frolov, E.N., Sousa, F.L., Miroshnichenko, M.L., Merkel, A.Y., Pimenov, N.V., Sorokin, D.Y., Ciordia, S., Mena, M.C., Ferrer, M., Golyshin, P.N., Lebedinsky, A.V., Cardoso Pereira, I.A. & Bonch-Osmolovskaya, E.A. (2020). Dissimilatory sulfate reduction in the archaeon ‘Candidatus vulcanisaeta moutnovskia’ sheds light on the evolution of sulfur metabolism. Nature Microbiology, 5(11), 1428-1438. doi:10.1038/s41564-020-0776-z
  45. Cordeiro, T., Paninho, A.B., Bernardo, M., Matos, I., Pereira, C.V., Serra, A.T., Matias, A. & Ventura, M.G. (2020). Biocompatible locust bean gum as mesoporous carriers for naproxen delivery. Materials Chemistry and Physics, 239 doi:10.1016/j.matchemphys.2019.121973
  46. Correia, R., Fernandes, B., Alves, P. M., Carrondo, M. J. T., & Roldão, A. (2020). Improving influenza HA-VLPs production in insect high five cells via adaptive laboratory evolution. Vaccines, 8(4), 1-15. doi:10.3390/vaccines8040589
  47. Correia, V.G., Bento, A., Pais, J., Rodrigues, R., Haliński, Ł.P., Frydrych, M., Greenhalgh, A., Stepnowski, P., Vollrath, F., King, A.W.T. & Silva Pereira, C (2020). The molecular structure and multifunctionality of the cryptic plant polymer suberin. Materials Today Bio, 5 doi:10.1016/j.mtbio.2019.100039
  48. Costa, J., Pronto-Laborinho, A., Pinto, S., Gromicho, M., Bonucci, S., Tranfield, E., Correia, C., Alexandre, B.M. & de Carvalho, M.  (2020). Investigating LGALS3BP/90 K glycoprotein in the cerebrospinal fluid of patients with neurological diseases. Scientific Reports, 10(1) doi:10.1038/s41598-020-62592-w
  49. Cristóvão, M.B., Janssens, R., Yadav, A., Pandey, S., Luis, P., Van der Bruggen, B., Dubey, K.K., Mandal, M.K., Crespo, J.G. & Pereira, V.J. (2020). Predicted concentrations of anticancer drugs in the aquatic environment: What should we monitor and where should we treat? Journal of Hazardous Materials, 392 doi:10.1016/j.jhazmat.2020.122330
  50. Cruz, A., Núñez-Montenegro, A., Mateus, P., & Delgado, R. (2020). Monitoring inorganic pyrophosphatase activity with the fluorescent dizinc(ii) complex of a macrocycle bearing one dansylamidoethyl antenna. Dalton Transactions, 49(27), 9487-9494. doi:10.1039/d0dt01673j
  51. Cruz, F., Faria, J. P., Rocha, M., Rocha, I., & Dias, O. (2020). A review of methods for the reconstruction and analysis of integrated genome-scale models of metabolism and regulation. Biochemical Society Transactions, 48(5), 1889-1903. doi:10.1042/BST20190840
  52. Cunha, J., Ibáñez, J., Teixeira-Santos, M., Brazão, J., Fevereiro, P., Martínez-Zapater, J. M., & Eiras‐Dias, J. E. (2020). Genetic relationships among portuguese cultivated and wild vitis vinifera L. germplasm. Frontiers in Plant Science, 11 doi:10.3389/fpls.2020.00127

  53. Da Silva, J. A., Meneghetti, M. R., & Soares, C. M. (2020). Molecular Dynamics Simulations Suggest a Possible Role for NO in the Polyol Synthesis of Silver Nanostructures. The Journal of Physical Chemistry C, 124(44), 24279-24288. doi:10.1021/acs.jpcc.0c08338

  54. Direito, R., Rocha, J., Serra, A.-., Fernandes, A., Freitas, M., Fernandes, E., Pinto, R., Bronze, R., Sepodes, B. & Figueira, M.-. (2020). Anti-inflammatory effects of persimmon (diospyros kaki L.) in experimental rodent rheumatoid arthritis. Journal of Dietary Supplements, 17(6), 663-683. doi:10.1080/19390211.2019.1645256
  55. do Amaral, M. N., Auler, P. A., Rossatto, T., Barros, P. M., Oliveira, M. M., & Braga, E. J. B. (2020). Long-term somatic memory of salinity unveiled from physiological, biochemical and epigenetic responses in two contrasting rice genotypes. Physiologia Plantarum, 170(2), 248-268. doi:10.1111/ppl.13149
  56. Do, T., Schaefer, K., Santiago, A.G., Coe, K.A., Fernandes, P.B., Kahne, D., Pinho, M.G. & Walker, S.  (2020). Staphylococcus aureus cell growth and division are regulated by an amidase that trims peptides from uncrosslinked peptidoglycan. Nature Microbiology, 5(2), 291-303. doi:10.1038/s41564-019-0632-1
  57. Dobrzanski, T., Pobre, V., Moreno, L.F., Barbosa, H.C.D.S., Monteiro, R.A., De Oliveira Pedrosa, F., De Souza, E.M., Arraiano, C.M. & Steffens, M.B.R. (2020). In silico prediction and expression profile analysis of small non-coding RNAs in herbaspirillum seropedicae SmR1. BMC Genomics, 21(1) doi:10.1186/s12864-019-6402-x
  58. Dos Santos, R. F., Andrade, J. M., Pissarra, J., Deutscher, M. P., & Arraiano, C. M. (2020). Hfq and RNase R mediate rRNA processing and degradation in a novel RNA quality control process. MBio, 11(5), 1-14. doi:10.1128/mBio.02398-20
  59. Drenkhan, R., Ganley, B., Martín-García, J., Vahalík, P., Adamson, K., Adamcíková, K., Ahumada, R., Blank, L., Bragança, H., Capretti, P., Cleary, M., Cornejo, C., Davydenko, K., Diez, J.J., Lehtijärvi, H.T.D., Dvorák, M., Enderle, R., Fourie, G., Georgieva, M., Ghelardini, L., Hantula, J., Ioos, R., Iturritxa, E., Kanetis, L., Karpun, N.N., Koltay, A., Landeras, E., Markovskaja, S., Mesanza, N., Milenkovic, I., Musolin, D.L., Nikolaou, K., Nowakowska, J.A., Ogris, N., Oskay, F., Oszako, T., Papazova-Anakieva, I., Paraschiv, M., Pasquali, M., Pecori, F., Rafoss, T., Raitelaityte, K., Raposo, R., Robin, C., Rodas, C.A., Santini, A., Sanz-Ros, A.V., Selikhovkin, A.V., Solla, A., Soukainen, M., Soulioti, N., Steenkamp, E.T., Tsopelas, P., Vemic, A., Vettraino, A.M., Wingfield, M.J., Woodward, S., Zamora-Ballesteros, C. & Mullett, M.S. (2020). Global geographic distribution and host range of fusarium circinatum, the causal agent of pine pitch canker. Forests, 11(11) doi:10.3390/F11070724
  60. Dufey, E., Bravo-San Pedro, J.M., Eggers, C., González-Quiroz, M., Urra, H., Sagredo, A.I., Sepulveda, D., Pihán, P., Carreras-Sureda, A., Hazari, Y., Sagredo, E.A., Gutierrez, D., Valls, C., Papaioannou, A., Acosta-Alvear, D., Campos, G., Domingos, P.M., Pedeux, R., Chevet, E., Alvarez, A., Godoy, P., Walter, P., Glavic, A., Kroemer, G. & Hetz, C.  (2020). Genotoxic stress triggers the activation of IRE1α-dependent RNA decay to modulate the DNA damage response. Nature Communications, 11(1) doi:10.1038/s41467-020-15694-y
  61. Edwardes Moore, E., Andrei, V., Zacarias, S., Pereira, I. A. C., & Reisner, E. (2020). Integration of a hydrogenase in a lead halide perovskite photoelectrode for tandem solar water splitting. ACS Energy Letters, 5(1), 232-237. doi:10.1021/acsenergylett.9b02437
  62. Edwards, M. J., Richardson, D. J., Paquete, C. M., & Clarke, T. A. (2020). Role of multiheme cytochromes involved in extracellular anaerobic respiration in bacteria. Protein Science, 29(4), 830-842. doi:10.1002/pro.3787
  63. Erny, G.L., Gomes, R.A., Santos, M.S.F., Santos, L., Neuparth, N., Carreiro-Martins, P., Marques, J.G., Guerreiro, A.C.L. & Gomes-Alves, P. (2020). Mining for peaks in LC-HRMS datasets using finnee - A case study with exhaled breath condensates from healthy, asthmatic, and COPD patients. ACS Omega, 5(26), 16089-16098. doi:10.1021/acsomega.0c01610
  64. Esteves, C. V., Costa, J., Bernard, H., Tripier, R., & Delgado, R. (2020). A squaraine-based dipicolylamine derivative acting as a turn-on mercury(ii) fluorescent probe in water. New Journal of Chemistry, 44(16), 6589-6600. doi:10.1039/d0nj00852d
  65. Fanna, D. J., Lima, L. M. P., Wei, G., Li, F., & Reynolds, J. K. (2020). A colorimetric chemosensor for quantification of exchangeable Cu2+ in soil. Chemosphere, 238 doi:10.1016/j.chemosphere.2019.124664
  66. Ferlizza, E., Isani, G., Dondi, F., Andreani, G., Vasylyeva, K., Bellei, E., Almeida, A.M. & Matzapetakis, M. (2020). Urinary proteome and metabolome in dogs (canis lupus familiaris): The effect of chronic kidney disease. Journal of Proteomics, 222 doi:10.1016/j.jprot.2020.103795
  67. Fernandes, B., Vidigal, J., Correia, R., Carrondo, M. J. T., Alves, P. M., Teixeira, A. P., & Roldão, A. (2020). Adaptive laboratory evolution of stable insect cell lines for improved HIV-gag VLPs production. Journal of Biotechnology, 307, 139-147. doi:10.1016/j.jbiotec.2019.10.004
  68. Fernandes, A. R., Mendonça-Martins, I., Santos, M. F. A., Raposo, L. R., Mendes, R., Marques, J., Romão C.C., Romão M.J., Santos-Silva T., Baptista, P. V. (2020). Improving the anti-inflammatory response via gold nanoparticle vectorization of CO-releasing molecules. ACS Biomaterials Science and Engineering, 6(2), 1090-1101. doi:10.1021/acsbiomaterials.9b01936
  69. Fernandes, M.B., Costa, M., Ribeiro, M.F., Siquenique, S., Sá Santos, S., Martins, J., Coelho, A.V., Silva, M.F.B., Rodrigues, C.M.P. & Solá, S. (2020). Reprogramming of lipid metabolism as a new driving force behind tauroursodeoxycholic acid-induced neural stem cell proliferation. Frontiers in Cell and Developmental Biology, 8 doi:10.3389/fcell.2020.00335
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  215. Vinagreiro, C. S., Lopes, R., Royo, B., Da Silva, G. J., & Pereira, M. M. (2020). Synthesis of iron(II)–N-heterocyclic carbene complexes: Paving the way for a new class of antibiotics. Molecules, 25(12) doi:10.3390/molecules25122917
  216. Wang, X. -., Liu, J. -., Chen, S., Yin, Y., Liu, Y., & Zhang, C. (2020). Hydroxy-octadecenoic acids instead of phorbol esters are responsible for the jatropha curcas kernel cake’s toxicity. Communications Biology, 3(1) doi:10.1038/s42003-020-0919-z
  217. Wirth, T., Bergot, M., Rasigade, J.-., Pichon, B., Barbier, M., Martins-Simoes, P., Jacob, L., Pike, R., Tissieres, P., Picaud, J.-., Kearns, A., Supply, P., Butin, M., Laurent, F., Adamkova, V., Barkham, T., Becker, K., Bennett, D., Claris, O., Creech, C.B., De Lencastre, H., Deighton, M., Denis, O., Ferguson, J., Huang, Y.-., Klingenberg, C., Ingebretsen, A., Laferrière, C., dos Santos, K.R.N., Schrenzel, J., Spiliopoulou, I., Stefani, S., TaekSoo, K., Tarkka, E., Friedrich, A., Vandenbroucke-Grauls, C., Ussher, J., Vandenesch, F., Westblade, L., Lindsay, J., Vandenesch, F., Larsen, A.R., Zanger, P., Kahl, B.C. & Aymerich, C.P. (2020). Niche specialization and spread of staphylococcus capitis involved in neonatal sepsis. Nature Microbiology, 5(5), 735-745. doi:10.1038/s41564-020-0676-2
  218. Xavier, J. C., Hordijk, W., Kauffman, S., Steel, M., & Martin, W. F. (2020). Autocatalytic chemical networks at the origin of metabolism. Proceedings of the Royal Society B: Biological Sciences, 287(1922) doi:10.1098/rspb.2019.2377
  219. Yu, K., Matzapetakis, M., Horvatić, A., Terré, M., Bach, A., Kuleš, J., Yeste, N., Gómez, N., Arroyo, L., Rodríguez-Tomàs, E., Peña, R., Guillemin, N., de Almeida, A.M., Eckersall, P.D. & Bassols, A. (2020). Metabolome and proteome changes in skeletal muscle and blood of pre-weaning calves fed leucine and threonine supplemented diets. Journal of Proteomics, 216 doi:10.1016/j.jprot.2020.103677
  220. Zacarias, S., Temporão, A., Carpentier, P., van der Linden, P., Pereira, I. A. C., & Matias, P. M. (2020). Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen. Journal of Biological Inorganic Chemistry, 25(6), 863-874. doi:10.1007/s00775-020-01814-y
  221. Zitare, U. A., Habib, M. H., Rozeboom, H., Mascotti, M. L., Todorovic, S., & Fraaije, M. W. (2020). Mutational and structural analysis of an ancestral fungal dye-decolorizing peroxidase. FEBS Journal, doi:10.1111/febs.15687

     

      Articles  not indexed in Scopus:

  1. D. Montet, Hazm J.E., Ouadia A., Chichi A., Mbaye M.S, Diop M.B., Mobinzo Kapay P., Biloso A., Diansambu I.M., Teyssier C., Scher J., Scippo M.L. & Barreto Crespo M.T. 2020. Use of Collective Expertise as a Tool to Reinforce Food Safety Management in Africa. J. Food Res 9(3): 9-18.

  2. Dragana P C de Barros, Patricia Reed, Marta Alves, Mariana G Pinho and Abel Oliva. 2020. Antimicrobial and Cytotoxic Effect of Nanostructured Lipid Carriers for Dermal Applications. Int J Biotechnol Recent Adv. 2020.
    DOI: https://dx.doi.org/10.18689/2639-4529.a3.002

  3. GONÇALVES N.M., Fernandes T., Nunes C., Rosa M.T.G., Matiolli C.C., Rodrigues M.A.A., Barros P.M., Oliveira M.M., Abreu I.A. (2020) SUMOylation of rice DELLA SLR1 modulates transcriptional responses and improves yield under salt stress. bioRxiv (12 May 2020) doi: https://doi.org/10.1101/2020.03.10.986224

  4. Kwambana-Adams, B. A.; E. K. Mulholland; C. Satzke; H. Smith-Vaughan;; A.Brueggemann; C. Whitney; I. Kirkham; R. Sá-Leão; J. Vidal; H. Graham;; D.Murdoch; G. Paranhos- Baccala; D. Goldblatt; W. S. Pomat; E. Best; P. McIntyre,J. McVernon; D. Weinberger; E. Dunne; J. A. Scott; A. W. Cripps; G. Mackenzie; S.Madhi; P. Torzillo; S. Graham; C. Kartasasmita; J. O. Awori; A. Smith; M. Hilty; C.Blyth; T. Pilishvili; L. Hammitt; R. Andrews; K. Crooks; W. P. Hanage; O. Wijburg;S. Morpeth; N. French; A. Cheng; C. Trappetti; E. Tuomanen; J. Rosch; N. Arora; G.Rodgers; I. M. Yoshida; P. Richmond; P. Licciardi; D. M. Ferreira. 2020. State-of-the-art in the pneumococcal field: Proceedings of the 11th International Symposium on Pneumococci and Pneumococcal Diseases (ISPPD-11)". Pneumonia. 12 1. doi: 10.1186/s41479-019-0064-y

  5.  J. D. Seixas, B. B. Sousa, M. C. Marques, A. Guerreiro, R. Traquete, T. Rodrigues, I. S. Albuquerque, M. Sousa, A. R. Lemos, P. M. F. Sousa, T. M. Bandeiras, D. Wu, S. K. Doyle, C. V. Robinson, A. N.

    Koehler, F. Corzana, P. M. Matias, G. J. L. Bernardes (2020) Structural and biophysical insights into the mode of covalent binding of rationally designed potent BMX inhibitors. RSC Chem. Biol., 1:251-262 http://dx.doi.org/10.1039/d0cb00033g

  6. Letra-Vilela, R., Quiteres, R., Murtinheira, F., Crevenna, A., Hensel, Z., & Herrera, F. (2020). New tools for the visualization of glial fibrillary acidic protein in living cells. Experimental Results, 1, E4. doi:10.1017/exp.2020.1

  7. MIQUITAIO D., Miguel A.M., Simbe J., Oliveira M.M., Abreu I.A. (2020) Exploring the Effect of Mono-cropping, Intercropping and Fertilizer Use in Maize (Zea mays L.) Production in Central Mozambique. International Journal of Agriculture and Forestry, 10(3): 76-83. doi:10.5923/j.ijaf.20201003.03

      

      Book Chapter:

  1. Andrade, J. M., dos Santos, R. F., & Arraiano, C. M. (2020). RNA structure analysis by chemical probing with DMS and CMCT doi:10.1007/978-1-0716-0231-7_13

  2. BARROS, P.M., Martinez-Gomez P., Kodad O., Farinha A.P., OLIVEIRA M.M. (2020) - 19.8 Prunus dulcis syn, Prunus amygdalus Almond.  In: “Biotechnology of Fruit and Nut Crops”, (J.I. Hormaza, R.E. Litz and F. Pliego-Alfaro, eds.) CAB International (CABI Publishing), Wallingford, UK. pp: 561-580.
    https//lccn.loc.gov/2019030908

  3. dos Santos, R. F., Arraiano, C. M., & Andrade, J. M. (2020). Isolation and analysis of bacterial ribosomes through sucrose gradient ultracentrifugation doi:10.1007/978-1-0716-0231-7_19
  4. Trindade, I.B., Moe, E., and Louro, R.O (2020). Siderophore-interacting proteins. June 2020. Encyclopedia of Inorganic and Bioinorganic Chemistry
  5. Giuffrè, A., Tomé, C. S., Fernandes, D. G. F., Zuhra, K., & Vicente, J. B. (2020). Hydrogen sulfide metabolism and signaling in the tumor microenvironment doi:10.1007/978-3-030-34025-4_17
  6. Graça, G., Lau, C. -. E., & Gonçalves, L. G. (2020). Exploring cancer metabolism: Applications of metabolomics and metabolic phenotyping in cancer research and diagnostics doi:10.1007/978-3-030-34025-4_19
  7. Pinto, C., Estrada, M. F., & Brito, C. (2020). In vitro and ex vivo models – the tumor microenvironment in a flask doi:10.1007/978-3-030-34025-4_23

  8. Leitão ST, Araújo SS, Rubiales D, Vaz Patto MC (2020) Chapter 9. Abiotic and biotic stresses interaction in Fabaceae plants. Contributions from the grain legumes/soilborne vascular diseases/drought stress triangle. In: The plant family Fabaceae - Biology and physiological responses to environmental stresses (Hasanuzzaman M, Araújo S, Gill S Eds.) Springer, Singapore. DOI: 10.1007/978-981-15-4752-2_9

  9. Rebelo, S. P., Pinto, C., Lopes, N., Martins, T. R., Alves, P. M., & Brito, C. (2020). 3D-3-culture: Tumor models to study heterotypic interactions in the tumor microenvironment doi:10.1007/978-1-0716-0171-6_8
  10. Silva, R. J. S., Mendes, J. P., Carrondo, M. J. T., Marques, P. M., & Peixoto, C. (2020). Continuous chromatography purification of virus-based biopharmaceuticals: A shortcut design method doi:10.1007/978-1-0716-0191-4_21

HandBook:

  1. Kiær L.P., Scherber C., Weih M., Rubiales D., Tavoletti S., Adam E., Patto M.C.V., Leitão S.T., Schmutz A., Schöb C., Pakeman R., Newton A.C., Karley A.J. (2020). Handbook for trait assessment in agricultural plant teams. Deliverable report D2.2 (D17) Handbook of protocols to assess traits in plant teams, developed by the EU-H2020 project DIVERSify (‘Designing innovative plant teams for ecosystem resilience and agricultural sustainability’), funded by the European Union’s Horizon 2020 Research and Innovation programme under Grant Agreement Number 727824. DOI:10.13140/RG.2.2.30716.56963

     Book Editor: 

  1. Patto, M.C.V. and Rubiales, D. (2020). Medicago truncatula host/nonhost legume rust interactions. In The Model Legume Medicago truncatula, F. de Bruijn (Ed.). doi:10.1002/9781119409144.ch48

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